Evidence map›Paper›PMID 15317778›Full record

ArticleJournal of bacteriology2004

Mutations altering the N-terminal receiver domain of NRI (NtrC) That prevent dephosphorylation by the NRII-PII complex in Escherichia coli.

Augen A Pioszak, Alexander J Ninfa

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Detection of allosteric signal transmission by information-theoretic analysis of protein dynamics.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2012
    Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Augen A PioszakDepartment of Biological Chemistry, University of Michigan Medical School, 1301 E. Catherine, Ann Arbor, MI 48109-0606, USA.
Alexander J Ninfa
University of Michigan–Ann Arbor · US

Funding

Structure/function analysis of the E. coli NIR/NRII signal transduction systemR01GM059637 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI NINFA, ALEXANDER J. · 2001 to 2009
$2.3M
NIGMS NIH HHS GM59637NIGMS NIH HHS R01 GM059637
6 · The paper itself

Abstract

The phosphorylated form of NRI is the transcriptional activator of nitrogen-regulated genes in Escherichia coli. NRI approximately P displays a slow autophosphatase activity and is rapidly dephosphorylated by the complex of the NRII and PII signal transduction proteins. Here we describe the isolation of two mutations, causing the alterations DeltaD10 and K104Q in the receiver domain of NRI, that were selected as conferring resistance to dephosphorylation by the NRII-PII complex. The mutations, which alter highly conserved residues near the D54 site of phosphorylation in the NRI receiver domain, resulted in elevated expression of nitrogen-regulated genes under nitrogen-rich conditions. The altered NRI receiver domains were phosphorylated by NRII in vitro but were defective in dephosphorylation. The DeltaD10 receiver domain retained normal autophosphatase activity but was resistant to dephosphorylation by the NRII-PII complex. The K104Q receiver domain lacked both the autophosphatase activity and the ability to be dephosphorylated by the NRII-PII complex. The properties of these altered proteins are consistent with the hypothesis that the NRII-PII complex is not a true phosphatase but rather collaborates with NRI approximately P to bring about its dephosphorylation.

Indexed as

MutationAdaptation, PhysiologicalAmino Acid SubstitutionBacterial ProteinsCulture MediaDNA-Binding ProteinsEscherichia coliEscherichia coli ProteinsGenes, BacterialNitrogen FixationPhosphoprotein PhosphatasesPhosphorylationPII Nitrogen Regulatory ProteinsProtein KinasesProtein Structure, TertiarySequence DeletionBacterial ProteinsCulture MediaDNA-Binding ProteinsEscherichia coli ProteinsglnG protein, E coliPhosphoprotein PhosphatasesPII Nitrogen Regulatory Proteinsprotein kinase-phosphatase NTRBProtein KinasesTrans-ActivatorsTranscription Factors

Identifiers

PMID15317778
PMCPMC516846
OpenAlexW2164774980

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.