Evidence map›Paper›PMID 15309660›Full record

ArticleFunctional & integrative genomics2005

Effect of herbicidal application of 2,4-dichlorophenoxyacetic acid in Arabidopsis.

Chitra Raghavan, Eng Kok Ong, Michael J Dalling, Trevor W Stevenson

Abstract read
PubMed Publisher
In one paragraph

Article in Functional & integrative genomics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Article
  3. Two Auxinic Herbicides AffectBiomolecules · 2021
    Article
  4. Article
  5. Bio indices for 2,4-D sensitivity between two plant species:Physiology and molecular biology of plants : an international journal of functional plant biology · 2016
    Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Chitra RaghavanDepartment of Applied Biotechnology and Environmental Biology, RMIT University, Bundoora, Victoria 3083, Australia.
Eng Kok Ong
Michael J Dalling
Trevor W Stevenson
RMIT University · AUAgriculture Victoria Services (Australia) · AUNufarm (Australia) · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The whole genome expression pattern of Arabidopsis in response to the auxinic herbicide 2,4-dichlorophenoxyacetic acid (2,4-D) was evaluated using the Affymetrix ATH1-121501 array. Arabidopsis plants were grown in vitro and were exposed to 1 mM 2,4-D for 1 h, after which time gene transcription levels were measured. In response to the treatment 148 genes showed increased levels of transcription and concurrently 85 genes showed decreased levels of transcript. Genes which showed significant change in transcription levels belonged to the following functional categories: transcription, metabolism, cellular communication and signal transduction, subcellular localisation, transport facilitation, protein fate, protein with binding function or cofactor requirement and regulation of/interaction with cellular environment. Interestingly 25.3% of the genes regulated by the treatment could not be classified into a known functional category. The data obtained from these experiments were used to assess the current model of auxinic herbicide action and indicated that 2,4-D not only modulates the expression of auxin, ethylene and abscisic acid (ABA) pathways but also regulates a wide variety of other cellular functions.

Indexed as

2,4-Dichlorophenoxyacetic AcidAbscisic AcidArabidopsisEthylenesGene Expression ProfilingGerminationHerbicidesIndoleacetic AcidsNucleic Acid HybridizationRNA, MessengerSeedsTranscription, GeneticUp-Regulation2,4-Dichlorophenoxyacetic AcidAbscisic AcidethyleneEthylenesHerbicidesIndoleacetic AcidsRNA, Messenger

Identifiers

PMID15309660
OpenAlexW2133570655

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.