Evidence map›Paper›PMID 15308744›Full record

ArticleJournal of virology2004

LEDGF/p75 determines cellular trafficking of diverse lentiviral but not murine oncoretroviral integrase proteins and is a component of functional lentiviral preintegration complexes.

Manuel Llano, Maria Vanegas, Oliver Fregoso, Dyana Saenz, Susan Chung, Mary Peretz, Eric M Poeschla

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 179 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
179citing papers in PubMed, 1 pooled it
9.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

179 citing papers in PubMed, 1 synthesis or guideline pooled it, 294 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Generation of Schlafen 8-Specific Antibodies.Antibodies (Basel, Switzerland) · 2026
    Article
  6. Review
  7. Article
  8. Review
  9. Review
  10. Capsid-host interactions for HIV-1 ingress.Microbiology and molecular biology reviews : MMBR · 2023
    Review
  11. The Integrase: An Overview of a Key Player Enzyme in the Antiviral Scenario.International journal of molecular sciences · 2023
    Review
  12. Review
  13. Complex Relationships between HIV-1 Integrase and Its Cellular Partners.International journal of molecular sciences · 2022
    Review
  14. Article
  15. Article
  16. Structure and function of retroviral integrase.Nature reviews. Microbiology · 2022
    Review
  17. Review
  18. Review
  19. Article
  20. Review

119 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Manuel LlanoMolecular Medicine Program, Mayo Clinic College of Medicine, Rochester, Minnesota 55905, USA.
Maria Vanegas
Oliver Fregoso
Dyana Saenz
Susan Chung
Mary Peretz
Eric M Poeschla
Mayo Clinic · US

Funding

NOVEL LENTIVIRAL VECTORS FOR SUSTAINED GENE EXPRESSIONR01AI047536 · NIAID · MAYO CLINIC ROCHESTER · PI POESCHLA, ERIC M. · 1999 to 2008
$1.8M
Lentiviral Genome ProcessingR21AI047536 · NIAID · MAYO CLINIC COLL OF MEDICINE, ROCHESTER · PI POESCHLA, ERIC M. · 2003 to 2003
$292k
NIAID NIH HHS AI47536NIAID NIH HHS R01 AI047536NIAID NIH HHS R21 AI047536
6 · The paper itself

Abstract

Human immunodeficiency virus type 1 (HIV-1), feline immunodeficiency virus (FIV), and Moloney murine leukemia virus (MoMLV) integrases were stably expressed to determine their intracellular trafficking. Each lentiviral integrase localized to cell nuclei in close association with chromatin while the murine oncoretroviral integrase was cytoplasmic. Fusions of pyruvate kinase to the lentiviral integrases did not reveal transferable nuclear localization signals. The intracellular trafficking of each was determined instead by the transcriptional coactivator LEDGF/p75, which was required for nuclear localization. Stable small interfering RNA expression eliminated detectable LEDGF/p75 expression and caused dramatic, stable redistribution of each lentiviral integrase from nucleus to cytoplasm while the distribution of MoMLV integrase was unaffected. In addition, endogenous LEDGF/p75 coimmunoprecipitated specifically with each lentiviral integrase. In vitro integration assays with preintegration complexes (PICs) showed that endogenous LEDGF/p75 is a component of functional HIV-1 and FIV PICs. However, HIV-1 and FIV infection and replication in LEDGF/p75-deficient cells was equivalent to that in control cells, whether cells were dividing or growth arrested. Two-long terminal repeat circle accumulation in nondividing cell nuclei was also equivalent to that of LEDGF/p75 wild-type cells. Virions produced in LEDGF/p75-deficient cells had normal infectivity. We conclude that LEDGF/p75 fully accounts for cellular trafficking of diverse lentiviral, but not oncoretroviral, integrases and is the main lentiviral integrase-to-chromatin tethering factor. While lentiviral PIC nuclear import is unaffected by LEDGF/p75 knockdown, this protein is a component of functional lentiviral PICs. A role in HIV-1 integration site distribution merits investigation.

Indexed as

Active Transport, Cell NucleusCell LineChromatinGene ExpressionGene Products, revHIV-1HumansImmunodeficiency Virus, FelineIntegrasesIntercellular Signaling Peptides and ProteinsIntronsLentivirusNuclear Localization SignalsOncogenic VirusesProtein BindingRetroviridaeChromatinGene Products, revIntegrasesIntercellular Signaling Peptides and Proteinslens epithelium-derived growth factorNuclear Localization Signalsrev Gene Products, Human Immunodeficiency Virus

Identifiers

PMID15308744
PMCPMC506940
OpenAlexW2141427436

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.