Evidence map›Paper›PMID 15308733›Full record

ArticleJournal of virology2004

In vivo analysis of the 3' untranslated region of GB virus B after in vitro mutagenesis of an infectious cDNA clone: persistent infection in a transfected tamarin.

Jae-Hwan Nam, Kristina Faulk, Ronald E Engle, Sugantha Govindarajan, Marisa St Claire, Jens Bukh

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 38 citations in OpenAlex.

  1. Marmosets as models of infectious diseases.Frontiers in cellular and infection microbiology · 2024
    Review
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  3. Animal Models Used in Hepatitis C Virus Research.International journal of molecular sciences · 2020
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  10. Characterization of a canine homolog of hepatitis C virus.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  11. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jae-Hwan NamHepatitis Viruses Section, Laboratory of Infectious Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland 20892-8009, USA.
Kristina Faulk
Ronald E Engle
Sugantha Govindarajan
Marisa St Claire
Jens Bukh
National Institute of Allergy and Infectious Diseases · USBioqual · USRancho Los Amigos National Rehabilitation Center · US

Funding

MOLECULAR BIOLOGY OF HEPATITIS C VIRUSZ01AI000570 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI BUKH, JENS · 1990 to 2005
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6 · The paper itself

Abstract

GB virus B (GBV-B), the virus most closely related to hepatitis C virus (HCV), infects tamarins and causes acute hepatitis. The 3' untranslated region (UTR) of an infectious GBV-B clone (pGBB) has a proximal short sequence followed by a poly(U) tract and a 3' terminal sequence. Our investigators previously demonstrated that the 3' terminal sequence was critical for in vivo infectivity. Here, we tested the effect of deleting the short sequence and/or the poly(U) tract from pGBB; infectivity of each mutant was tested by intrahepatic transfection of two tamarins with transcribed RNA. A mutant lacking both regions was not viable. However, mutants lacking either the short sequence or the poly(U) tract were viable. All four tamarins had a wild-type-like acute infection and developed acute hepatitis. Whereas we found that five tamarins transfected with the wild-type clone pGBB had acute resolving infection, one tamarin transfected with the poly(U) deletion mutant became persistently infected. This animal had viremia and hepatitis until its death at week 90. The genomes recovered at weeks 2, 7, 15, 20, 60, and 90 lacked the poly(U) stretch. Eight amino acid changes were identified at week 90. One change, in the putative p7 protein, was dominant at week 15. Thus, persistence of GBV-B, like persistence of HCV, was associated with the emergence of virus variants. Four tamarins inoculated with serum collected at weeks 2 and 90 from the tamarin with persistent infection had an acute resolving infection. Nonetheless, the demonstration that GBV-B can persist in tamarins strengthens its relevance as a surrogate model for the study of HCV.

Indexed as

Genetic Engineering3' Untranslated RegionsAnimalsBase SequenceCloning, MolecularDNA, ComplementaryFlaviviridae InfectionsGB virus BGenome, ViralGreen Fluorescent ProteinsHepatitis, Viral, AnimalLuminescent ProteinsMolecular Sequence DataMutagenesisPolyproteinsPoly U3' Untranslated RegionsDNA, ComplementaryGreen Fluorescent ProteinsLuminescent ProteinsPolyproteinsPoly U

Identifiers

PMID15308733
PMCPMC506939
OpenAlexW1966313414

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.