Evidence map›Paper›PMID 15308718›Full record

ArticleJournal of virology2004

Identification and characterization of a new cross-reactive human immunodeficiency virus type 1-neutralizing human monoclonal antibody.

Mei-Yun Zhang, Xiaodong Xiao, Igor A Sidorov, Vidita Choudhry, Fatim Cham, Peng Fei Zhang, Peter Bouma, Michael Zwick, Anil Choudhary, David C Montefiori and 4 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 80 citations in OpenAlex.

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  15. Candidate antibody-based therapeutics against HIV-1.BioDrugs : clinical immunotherapeutics, biopharmaceuticals and gene therapy · 2012
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Mei-Yun ZhangHuman Immunovirology Group, Laboratory of Experimental and Computational Biology, Center for Cancer Research, National Cancer Institute-Frederick, NIH, Frederick, Maryland 21702-1201, USA.
Xiaodong Xiao
Igor A Sidorov
Vidita Choudhry
Fatim Cham
Peng Fei Zhang
Peter Bouma
Michael Zwick
Anil Choudhary
David C Montefiori
Christopher C Broder
Dennis R Burton
Gerald V Quinnan
Dimiter S Dimitrov
Center for Cancer Research · USScripps Research Institute · USUniformed Services University of the Health Sciences · USDuke University Hospital · US

Funding

HIV-1 gp140 Oligomers as Vaccine ImmunogensP01AI048280 · NIAID · The Johns Hopkins University · PI QUINNAN, GERALD V. · 2001 to 2003
$4.6M
Viral Envelope Glycoprotein Interactions with ReceptorsZ01BC010257 · BC · BASIC SCIENCES · PI DIMITROV, DIMTER S. · 1996 to 2005
–
NCI NIH HHS N01 CO012400NCI NIH HHS N01-CO-12400NIAID NIH HHS AI47438NIAID NIH HHS AI48280NIAID NIH HHS AI48380NIAID NIH HHS P01 AI048280
6 · The paper itself

Abstract

The identification and characterization of new human monoclonal antibodies (hMAbs) able to neutralize primary human immunodeficiency virus type 1 (HIV-1) isolates from different subtypes may help in our understanding of the mechanisms of virus entry and neutralization and in the development of entry inhibitors and vaccines. For enhanced selection of broadly cross-reactive antibodies, soluble HIV-1 envelope glycoproteins (Envs proteins) from two isolates complexed with two-domain soluble CD4 (sCD4) were alternated during panning of a phage-displayed human antibody library; these two Env proteins (89.6 and IIIB gp140s), and one additional Env (JR-FL gp120) alone and complexed with sCD4 were used for screening. An antibody with relatively long HCDR3 (17 residues), designated m14, was identified that bound to all antigens and neutralized heterologous HIV-1 isolates in multiple assay formats. Fab m14 potently neutralized selected well-characterized subtype B isolates, including JRCSF, 89.6, IIIB, and Yu2. Immunoglobulin G1 (IgG1) m14 was more potent than Fab m14 and neutralized 7 of 10 other clade B isolates; notably, although the potency was on average significantly lower than that of IgG1 b12, IgG1 m14 neutralized two of the isolates with significantly lower 50% inhibitory concentrations than did IgG1 b12. IgG1 m14 neutralized four of four selected clade C isolates with potency higher than that of IgG1 b12. It also neutralized 7 of 17 clade C isolates from southern Africa that were difficult to neutralize with other hMAbs and sCD4. IgG1 m14 neutralized four of seven primary HIV-1 isolates from other clades (A, D, E, and F) much more efficiently than did IgG1 b12; for the other three isolates, IgG b12 was much more potent. Fab m14 bound with high (nanomolar range) affinity to gp120 and gp140 from various isolates; its binding was reduced by soluble CD4 and antibodies recognizing the CD4 binding site (CD4bs) on gp120, and its footprint as defined by alanine-scanning mutagenesis overlaps that of b12. These results suggest that m14 is a novel CD4bs cross-reactive HIV-1-neutralizing antibody that exhibits a different inhibitory profile compared to the only known potent broadly neutralizing CD4bs human antibody, b12, and may have implications for our understanding of the mechanisms of immune evasion and for the development of inhibitors and vaccines.

Indexed as

AlanineAmino Acid SequenceAntibodies, MonoclonalBacteriophagesBase SequenceBiosensing TechniquesCD4 AntigensCell LineCross Reactionsenv Gene Products, Human Immunodeficiency VirusEpitopesGene Products, envGenomicsHIV-1HIV AntibodiesHIV Envelope Protein gp120AlanineAntibodies, MonoclonalCD4 Antigensenv Gene Products, Human Immunodeficiency VirusEpitopesGene Products, envgp140 envelope protein, Human immunodeficiency virus 1HIV AntibodiesHIV Envelope Protein gp120Immunoglobulin Fab FragmentsImmunoglobulin GPeptide Library

Identifiers

PMID15308718
PMCPMC506938
OpenAlexW2102670802

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.