Evidence map›Paper›PMID 15306378›Full record

ReviewPhilosophical transactions of the Royal Society of London. Series B, Biological sciences2004

Protein structure, stability and solubility in water and other solvents.

C Nick Pace, Saul Treviño, Erode Prabhakaran, J Martin Scholtz

Open access · greenAbstract readReview
In one paragraph

Review in Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 96 papers.

0numbers the graph read from it
0cells of the map it votes in
96citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

96 citing papers in PubMed, 381 citations in OpenAlex.

  1. Article
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  5. Review
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  10. Review
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  12. Article
  13. Solvent constraints for biopolymer folding and evolution in extraterrestrial environments.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article

36 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

C Nick PaceDepartment of Medical Biochemistry and Genetics, Center for Advanced Biomolecular Research, Texas A&M University, College Station, TX 77843, USA. nickpace@tamu.edu
Saul Treviño
Erode Prabhakaran
J Martin Scholtz
Texas A&M University · US

Funding

ENERGETICS AND MECHANISM OF FOLDING OF RIBONUCLEASE T1R01GM037039 · NIGMS · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI PACE, CARLOS N · 1986 to 2006
$1.6M
LOCAL AND LONG RANGE INTERACTIONS IN PROTEIN FOLDINGR01GM052483 · NIGMS · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI SCHOLTZ, J. MARTIN · 2001 to 2004
$806k
HIERARCHY OF PROTEIN FOLDING AND STABILITYR29GM052483 · NIGMS · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI SCHOLTZ, J. MARTIN · 1995 to 1999
–
NIGMS NIH HHS GM-37039NIGMS NIH HHS GM-52483
6 · The paper itself

Abstract

Proteins carry out the most difficult tasks in living cells. They do so by interacting specifically with other molecules. This requires that they fold to a unique, globular conformation that is only marginally more stable than the large ensemble of unfolded states. The folded state is stabilized mainly by the burial and tight packing of over 80% of the peptide groups and non-polar side chains. If life as we know it is to exist in a solvent other than water, the folded state must be stable and soluble in the new solvent. Our analysis suggests that proteins will be unstable in most polar solvents such as ethanol, extremely stable in non-polar solvents such as cyclohexane, and even more stable in a vacuum. Our solubility studies suggest that protein solubility will be markedly lower in polar solvents such as ethanol and that proteins will be essentially insoluble in non-polar solvents such as cyclohexane. For these and other reasons it seems unlikely that the life we know could exist in any solvent system other than water.

Indexed as

Models, ChemicalCyclohexanesEthanolHydrogen BondingProtein ConformationProtein FoldingProteinsSolubilitySolventsVacuumWaterCyclohexanesEthanolProteinsSolventsWater

Identifiers

PMID15306378
PMCPMC1693406
OpenAlexW2157607146

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.