Evidence map›Paper›PMID 15298995›Full record

ArticleJournal of the American Medical Informatics Association : JAMIA

QIS: A framework for biomedical database federation.

Luis Marenco, Tzuu-Yi Wang, Gordon Shepherd, Perry L Miller, Prakash Nadkarni

Abstract read
In one paragraph

Article in Journal of the American Medical Informatics Association : JAMIA. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Bringing Web 2.0 to bioinformatics.Briefings in bioinformatics · 2009
    Article
  8. Neuroinformatics: from bioinformatics to databasing the brain.Bioinformatics and biology insights · 2008
    Article
  9. Article
  10. Using web ontology language to integrate heterogeneous databases in the neurosciences.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2006
    Article
  11. Automated database mediation using ontological metadata mappings.Journal of the American Medical Informatics Association : JAMIA
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Luis MarencoCenter for Medical Informatics, Yale University, School of Medicine, New Haven, CT 06520-8009, USA. luis.marenco@yale.edu
Tzuu-Yi Wang
Gordon Shepherd
Perry L Miller
Prakash Nadkarni

Funding

SENSELAB: INTEGRATION OF MULTIDISCIPLINARY SENSORY DATAP01DC004732 · NIDCD · YALE UNIVERSITY · PI SHEPHERD, GORDON · 2000 to 2008
$10.2M
DESIGN AND IMPLEMENTATION OF PHARMACOGENETIC DATABASEU01ES010867 · NIEHS · YALE UNIVERSITY · PI NADKARNI, PRAKASH M. · 2000 to 2002
$1.4M
IAIMS IMPLEMENTATION AT YALEG08LM005583 · NLM · YALE UNIVERSITY · PI PATON, JOHN A · 1995 to 1999
–
NIDCD NIH HHS P01 DC04732NIEHS NIH HHS U01 ES10867NLM NIH HHS G08 LM05583
6 · The paper itself

Abstract

Query Integrator System (QIS) is a database mediator framework intended to address robust data integration from continuously changing heterogeneous data sources in the biosciences. Currently in the advanced prototype stage, it is being used on a production basis to integrate data from neuroscience databases developed for the SenseLab project at Yale University with external neuroscience and genomics databases. The QIS framework uses standard technologies and is intended to be deployable by administrators with a moderate level of technological expertise: It comes with various tools, such as interfaces for the design of distributed queries. The QIS architecture is based on a set of distributed network-based servers, data source servers, integration servers, and ontology servers, that exchange metadata as well as mappings of both metadata and data elements to elements in an ontology. Metadata version difference determination coupled with decomposition of stored queries is used as the basis for partial query recovery when the schema of data sources alters.

Indexed as

Database Management SystemsDatabases as TopicSystems IntegrationComputer Communication NetworksGenomicsInformation Storage and RetrievalMedical Informatics ApplicationsPilot ProjectsSoftwareUser-Computer InterfaceVocabulary, Controlled

Identifiers

PMID15298995
PMCPMC524633

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.