Evidence map›Paper›PMID 15298916›Full record

ArticleBiophysical journal2004

Formation and destabilization of actin filaments with tetramethylrhodamine-modified actin.

Dmitry S Kudryashov, Martin Phillips, Emil Reisler

Open access · bronzeAbstract readEvaluation Study
In one paragraph

Article in Biophysical journal, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.2field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. International journal of molecular sciences · 2021
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. mDia1 and formins: screw cap of the actin filament.Biophysics (Nagoya-shi, Japan) · 2012
    Review
  10. Article
  11. Article
  12. Article
  13. Connecting actin monomers by iso-peptide bond is a toxicity mechanism of the Vibrio cholerae MARTX toxin.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  14. Article
  15. Article
  16. The crystal structure of a cross-linked actin dimer suggests a detailed molecular interface in F-actin.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  17. BRCA2 BRC motifs bind RAD51-DNA filaments.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  18. Actin polymerization kinetics, cap structure, and fluctuations.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  19. Actin-destabilizing factors disrupt filaments by means of a time reversal of polymerization.Proceedings of the National Academy of Sciences of the United States of America · 2004
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Dmitry S KudryashovDepartment of Chemistry and Biochemistry, and the Molecular Biology Institute, University of California, Los Angeles, California, USA. dkudryas@ucla.edu
Martin Phillips
Emil Reisler
University of California, Los Angeles · US

Funding

DYNAMIC EVENTS IN MYOSIN DURING CONTRACTION OF MUSCLER01AR022031 · NIAMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI REISLER, EMIL · 1986 to 2004
$2.5M
NIAMS NIH HHS AR 22031NIAMS NIH HHS R01 AR022031
6 · The paper itself

Abstract

Actin labeling at Cys(374) with tethramethylrhodamine derivatives (TMR-actin) has been widely used for direct observation of the in vitro filaments growth, branching, and treadmilling, as well as for the in vivo visualization of actin cytoskeleton. The advantage of TMR-actin is that it does not lock actin in filaments (as rhodamine-phalloidin does), possibly allowing for its use in investigating the dynamic assembly behavior of actin polymers. Although it is established that TMR-actin alone is polymerization incompetent, the impact of its copolymerization with unlabeled actin on filament structure and dynamics has not been tested yet. In this study, we show that TMR-actin perturbs the filaments structure when copolymerized with unlabeled actin; the resulting filaments are more fragile and shorter than the control filaments. Due to the increased severing of copolymer filaments, TMR-actin accelerates the polymerization of unlabeled actin in solution also at mole ratios lower than those used in most fluorescence microscopy experiments. The destabilizing and severing effect of TMR-actin is countered by filament stabilizing factors, phalloidin, S1, and tropomyosin. These results point to an analogy between the effects of TMR-actin and severing proteins on F-actin, and imply that TMR-actin may be inappropriate for investigations of actin filaments dynamics.

Indexed as

Actin CytoskeletonActinsAnimalsArtifactsDimerizationMicroscopy, FluorescenceMolecular Motor ProteinsMuscle, SkeletalProtein ConformationProtein DenaturationRabbitsRhodaminesStaining and LabelingActinsMolecular Motor ProteinsRhodaminestetramethylrhodamine

Identifiers

PMID15298916
PMCPMC1304452
OpenAlexW2089700111

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.