Evidence map›Paper›PMID 15292126›Full record

ArticleJournal of bacteriology2004

The Escherichia coli GTPase CgtAE cofractionates with the 50S ribosomal subunit and interacts with SpoT, a ppGpp synthetase/hydrolase.

P Wout, K Pu, S M Sullivan, V Reese, S Zhou, B Lin, J R Maddock

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 153 citations in OpenAlex.

  1. Article
  2. Article
  3. YbiB: a novel interactor of the GTPase ObgE.Nucleic acids research · 2023
    Article
  4. Review
  5. Review
  6. Cellular perception of growth rate and the mechanistic origin of bacterial growth law.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Regulation ofFrontiers in microbiology · 2021
    Article
  12. The Mla pathway ineLife · 2020
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Transcriptional Responses to ppGpp and DksA.Annual review of microbiology · 2018
    Review
  20. RiceG3 (Bethesda, Md.) · 2018
    Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

P WoutDepartment of Molecular, Cellular and Developmental Biology, University of Michigan, Ann Arbor, 48109, USA.
K Pu
S M Sullivan
V Reese
S Zhou
B Lin
J R Maddock
University of Michigan–Ann Arbor · US

Funding

BIOCHEMICAL AND GENETIC ANALYSIS OF CGTA IN CAULOBACTERR01GM055133 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MADDOCK, JANINE R. · 1998 to 2002
$559k
NIGMS NIH HHS GM-55133NIGMS NIH HHS R01 GM055133
6 · The paper itself

Abstract

CgtA(E)/Obg(E)/YhbZ is an Escherichia coli guanine nucleotide binding protein of the Obg/GTP1 subfamily whose members have been implicated in a number of cellular functions including GTP-GDP sensing, sporulation initiation, and translation. Here we describe a kinetic analysis of CgtA(E) with guanine nucleotides and show that its properties are similar to those of the Caulobacter crescentus homolog CgtA(C). CgtA(E) binds both GTP and GDP with moderate affinity, shows high guanine nucleotide exchange rate constants for both nucleotides, and has a relatively low GTP hydrolysis rate. We show that CgtA(E) is associated predominantly with the 50S ribosomal subunit. Interestingly, CgtA(E) copurifies with SpoT, a ribosome-associated ppGpp hydrolase/synthetase involved in the stress response. The interaction between CgtA(E) and SpoT was confirmed by reciprocal coprecipitation experiments and by two-hybrid assays. These studies raise the possibility that the ribosome-associated CgtA(E) is involved in the SpoT-mediated stress response.

Indexed as

Bacterial ProteinsCaulobacter crescentusEscherichia coliEscherichia coli ProteinsGuanosine DiphosphateGuanosine TriphosphateLigasesMonomeric GTP-Binding ProteinsPrecipitin TestsProtein BindingProtein Interaction MappingRibosomesTwo-Hybrid System TechniquesBacterial ProteinsCgtA protein, bacteriaEscherichia coli Proteinsguanosine 3',5'-polyphosphate synthetasesGuanosine DiphosphateGuanosine TriphosphateLigasesMonomeric GTP-Binding ProteinsObgE protein, E coli

Identifiers

PMID15292126
PMCPMC490892
OpenAlexW2141378551

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.