Evidence map›Paper›PMID 15280500›Full record

ArticleJournal of virology2004

Characterization of the mouse adeno-associated virus AAVS1 ortholog.

Nathalie Dutheil, Miran Yoon-Robarts, Peter Ward, Els Henckaerts, Lucy Skrabanek, Kenneth I Berns, Fabien Campagne, R Michael Linden

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Genotoxicity in Mice Following AAV Gene Delivery: A Safety Concern for Human Gene Therapy?Molecular therapy : the journal of the American Society of Gene Therapy · 2016
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Site-specific integration of adeno-associated virus involves partial duplication of the target locus.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  10. Article
  11. Article
  12. Targeting site-specific chromosome integration.Acta biochimica Polonica · 2005
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Nathalie DutheilCarl C. Icahn Institute for Gene Therapy and Molecular Medicine, Mount Sinai School of Medicine, One Gustave L. Levy Pl., Box 1496, New York, NY 10029, USA.
Miran Yoon-Robarts
Peter Ward
Els Henckaerts
Lucy Skrabanek
Kenneth I Berns
Fabien Campagne
R Michael Linden
Institute for Molecular Medicine · USIcahn School of Medicine at Mount Sinai · USUniversity of Florida · US

Funding

INTEGRATION OF AAV2 GENOME TO MUSCLE-SPECIFIC DNA REGIONR01GM062234 · NIGMS · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI LINDEN, RALPH MICHAEL · 2001 to 2005
$2.0M
MOLECULAR THERAPY FOR RENAL DISEASEP01DK050795 · NIDDK · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI KLOTMAN, PAUL EVAN · 1996 to 2001
$1.3M
NIDDK NIH HHS DK50795NIDDK NIH HHS P01 DK050795NIGMS NIH HHS GM62234NIGMS NIH HHS R01 GM062234
6 · The paper itself

Abstract

The nonpathogenic human adeno-associated virus (AAV) has developed a mechanism to integrate its genome into human chromosome 19 at 19q13.4 (termed AAVS1), thereby establishing latency. Here, we provide evidence that the chromosomal signals required for site-specific integration are conserved in the mouse genome proximal to the recently identified Mbs85 gene. These sequence motifs can be specifically nicked by the viral Rep protein required for the initiation of site-specific AAV DNA integration. Furthermore, these signals can serve as a minimal origin for Rep-dependent DNA replication. In addition, we isolated the mouse Mbs85 proximal promoter and show transcriptional activity in three mouse cell lines.

Indexed as

Virus IntegrationAnimalsBase SequenceCell LineChromosomes, Human, Pair 19DependovirusHeLa CellsHumansMiceMolecular Sequence DataNIH 3T3 CellsProteinsSequence AlignmentProteins

Identifiers

PMID15280500
PMCPMC479059
OpenAlexW2150026635

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.