Evidence map›Paper›PMID 15280481›Full record

ArticleJournal of virology2004

Putative autocleavage of outer capsid protein micro1, allowing release of myristoylated peptide micro1N during particle uncoating, is critical for cell entry by reovirus.

Amy L Odegard, Kartik Chandran, Xing Zhang, John S L Parker, Timothy S Baker, Max L Nibert

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 121 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Viral Capsid and Polymerase in Reoviridae.Sub-cellular biochemistry · 2022
    Article
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  8. Review
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15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Amy L OdegardDepartment of Microbiology and Molecular Genetics, Harvard Medical School, 200 Longwood Ave., Boston, MA 02115, USA.
Kartik Chandran
Xing Zhang
John S L Parker
Timothy S Baker
Max L Nibert
Harvard University · USPurdue University West Lafayette · US

Funding

VIRUS ASSEMBLY AND TRANSMISSIONP01AI045976 · NIAID · PURDUE UNIVERSITY WEST LAFAYETTE · PI KUHN, RICHARD J. · 1999 to 2008
$8.8M
MICROSCOPY &IMAGE ANALYSIS OF UNSTAINED MACROMOLECULESR01GM033050 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BAKER, TIMOTHY S · 1985 to 2017
$4.3M
REOVIRUS OUTER-CAPSID ASSEMBLY &FUNCTIONS IN CELL ENTRYR01AI046440 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI NIBERT, MAX L. · 2001 to 2005
$1.7M
Viral inclusion bodies and aggresomes: form and functionK08AI052209 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI PARKER, JOHN S · 2002 to 2004
$383k
NIAID NIH HHS K08 AI052209NIAID NIH HHS K08 AI52209NIAID NIH HHS P01 AI045976NIAID NIH HHS R01 AI046440NIAID NIH HHS R01 AI46440NIGMS NIH HHS R01 GM033050NIGMS NIH HHS R01 GM33050
6 · The paper itself

Abstract

Several nonenveloped animal viruses possess an autolytic capsid protein that is cleaved as a maturation step during assembly to yield infectious virions. The 76-kDa major outer capsid protein micro1 of mammalian orthoreoviruses (reoviruses) is also thought to be autocatalytically cleaved, yielding the virion-associated fragments micro1N (4 kDa; myristoylated) and micro1C (72 kDa). In this study, we found that micro1 cleavage to yield micro1N and micro1C was not required for outer capsid assembly but contributed greatly to the infectivity of the assembled particles. Recoated particles containing mutant, cleavage-defective micro1 (asparagine --> alanine substitution at amino acid 42) were competent for attachment; processing by exogenous proteases; structural changes in the outer capsid, including micro1 conformational change and sigma1 release; and transcriptase activation but failed to mediate membrane permeabilization either in vitro (no hemolysis) or in vivo (no coentry of the ribonucleotoxin alpha-sarcin). In addition, after these particles were allowed to enter cells, the delta region of micro1 continued to colocalize with viral core proteins in punctate structures, indicating that both elements remained bound together in particles and/or trapped within the same subcellular compartments, consistent with a defect in membrane penetration. If membrane penetration activity was supplied in trans by a coinfecting genome-deficient particle, the recoated particles with cleavage-defective micro1 displayed much higher levels of infectivity. These findings led us to propose a new uncoating intermediate, at which particles are trapped in the absence of micro1N/micro1C cleavage. We additionally showed that this cleavage allowed the myristoylated, N-terminal micro1N fragment to be released from reovirus particles during entry-related uncoating, analogous to the myristoylated, N-terminal VP4 fragment of picornavirus capsid proteins. The results thus suggest that hydrophobic peptide release following capsid protein autocleavage is part of a general mechanism of membrane penetration shared by several diverse nonenveloped animal viruses.

Indexed as

AnimalsBaculoviridaeCapsid ProteinsCell Membrane PermeabilityCells, CulturedL CellsLepidopteraMiceMutationMyristic AcidsOrthoreovirus, MammalianPeptidesProtein ConformationSpodopteraVirionVirus AssemblyCapsid Proteinsmu1 protein, ReovirusMyristic AcidsPeptides

Identifiers

PMID15280481
PMCPMC479062
OpenAlexW2117582775

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.