Evidence map›Paper›PMID 15280476›Full record

ArticleJournal of virology2004

Model for the interaction of gammaherpesvirus 68 RING-CH finger protein mK3 with major histocompatibility complex class I and the peptide-loading complex.

Xiaoli Wang, Lonnie Lybarger, Rose Connors, Michael R Harris, Ted H Hansen

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 50 citations in OpenAlex.

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  9. Systematic identification of type I and type II interferon-induced antiviral factors.Proceedings of the National Academy of Sciences of the United States of America · 2012
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Xiaoli WangDepartment of Pathology and Immunology, Box 8118, Washington University School of Medicine, 4566 Scott Ave., St. Louis, MO 63110, USA.
Lonnie Lybarger
Rose Connors
Michael R Harris
Ted H Hansen
Washington University in St. Louis · US

Funding

MHC-I regulation by herpes virusR01AI019687 · NIAID · WASHINGTON UNIVERSITY · PI FREMONT, DAVED H. · 1985 to 2016
$5.2M
MR1 BIOCHEMICAL FEATURES AND IMMUNOLOGICAL FUNCTIONSR01AI046553 · NIAID · WASHINGTON UNIVERSITY · PI FREMONT, DAVED H., HOFT, DANIEL F. · 2000 to 2014
$4.6M
MOLECULAR CHAPERONES OF CLASS I MHCR01AI042793 · NIAID · WASHINGTON UNIVERSITY · PI HANSEN, TED H · 1999 to 2003
$1.2M
MOLECULAR CHAPERONES OF CLASS I MHCR21AI042793 · NIAID · WASHINGTON UNIVERSITY · PI HANSEN, TED H · 1999 to 1999
–
NIAID NIH HHS AI19687NIAID NIH HHS AI42793NIAID NIH HHS AI46553NIAID NIH HHS R01 AI019687NIAID NIH HHS R01 AI042793NIAID NIH HHS R01 AI046553NIAID NIH HHS R21 AI042793NIAID NIH HHS T32AI07063
6 · The paper itself

Abstract

The mK3 protein of gammaherpesvirus 68 and the kK5 protein of Kaposi's sarcoma-associated herpesvirus are members of a family of structurally related viral immune evasion molecules that all possess a RING-CH domain with ubiquitin ligase activity. These proteins modulate the expression of major histocompatibility complex class I molecules (mK3 and kK5) as well as other molecules like ICAM-1 and B7.2 (kK5). Previously, mK3 was shown to ubiquitinate nascent class I molecules, resulting in their rapid degradation, and this process was found to be dependent on TAP and tapasin, endoplasmic reticulum molecules involved in class I assembly. Here, we demonstrate that in murine cells, kK5 does not affect class I expression but does downregulate human B7.2 molecules in a TAP/tapasin-independent manner. These differences in substrate specificity and TAP/tapasin dependence between mK3 and kK5 permitted us, using chimeric molecules, to map the sites of mK3 interaction with TAP/tapasin and to determine the requirements for substrate recognition by mK3. Our findings indicate that mK3 interacts with TAP1 and -2 via their C-terminal domains and with class I molecules via their N-terminal domains. Furthermore, by orienting the RING-CH domain of mK3 appropriately with respect to class I, mK3 binding to TAP/tapasin, rather than the presence of unique sequences in class I, appears to be the primary determinant of substrate specificity.

Indexed as

Amino Acid SequenceAnimalsAntigens, CDAntiportersATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily B, Member 2B7-2 AntigenDown-RegulationGammaherpesvirinaeHerpesvirus 8, HumanHistocompatibility Antigens Class IHumansImmunoglobulinsMembrane GlycoproteinsMembrane Transport ProteinsMiceAntigens, CDAntiportersATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily B, Member 2B7-2 AntigenCD86 protein, humanCd86 protein, mouseHistocompatibility Antigens Class IImmunoglobulinsMembrane GlycoproteinsMembrane Transport ProteinsRecombinant Fusion ProteinsTAP1 protein, humanTap1 protein, mousetapasinUbiquitin-Protein LigasesViral Proteins

Identifiers

PMID15280476
PMCPMC479079
OpenAlexW1998535540

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.