Evidence map›Paper›PMID 15280237›Full record

ArticleGenetics2004

Requirement for sex comb on midleg protein interactions in Drosophila polycomb group repression.

Aidan J Peterson, Daniel R Mallin, Nicole J Francis, Carrie S Ketel, Joyce Stamm, Rochus K Voeller, Robert E Kingston, Jeffrey A Simon

Abstract readComparative Study
In one paragraph

Article in Genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Chromatin regulation and dynamics in stem cells.Current topics in developmental biology · 2020
    Review
  6. Development (Cambridge, England) · 2018
    Article
  7. Samd7 is a cell type-specific PRC1 component essential for establishing retinal rod photoreceptor identity.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Aidan J PetersonDepartment of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, Minnesota 55455, USA.
Daniel R Mallin
Nicole J Francis
Carrie S Ketel
Joyce Stamm
Rochus K Voeller
Robert E Kingston
Jeffrey A Simon

Funding

Molecular Role of a Drosophila Polycomb Group RepressorF32GM020895 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI MALLIN, DANIEL R · 2001 to 2002
$86k
NICHD NIH HHS HD07480NIGMS NIH HHS GM20895
6 · The paper itself

Abstract

The Drosophila Sex Comb on Midleg (SCM) protein is a transcriptional repressor of the Polycomb group (PcG). Although genetic studies establish SCM as a crucial PcG member, its molecular role is not known. To investigate how SCM might link to PcG complexes, we analyzed the in vivo role of a conserved protein interaction module, the SPM domain. This domain is found in SCM and in another PcG protein, Polyhomeotic (PH), which is a core component of Polycomb repressive complex 1 (PRC1). SCM-PH interactions in vitro are mediated by their respective SPM domains. Yeast two-hybrid and in vitro binding assays were used to isolate and characterize >30 missense mutations in the SPM domain of SCM. Genetic rescue assays showed that SCM repressor function in vivo is disrupted by mutations that impair SPM domain interactions in vitro. Furthermore, overexpression of an isolated, wild-type SPM domain produced PcG loss-of-function phenotypes in flies. Coassembly of SCM with a reconstituted PRC1 core complex shows that SCM can partner with PRC1. However, gel filtration chromatography showed that the bulk of SCM is biochemically separable from PH in embryo nuclear extracts. These results suggest that SCM, although not a core component of PRC1, interacts and functions with PRC1 in gene silencing.

Indexed as

Gene SilencingPhenotypeAmino Acid SequenceAnimalsBlotting, WesternChromatography, GelDNA-Binding ProteinsDNA PrimersDrosophilaDrosophila ProteinsGene ComponentsImmunoprecipitationMolecular Sequence DataMutation, MissenseNucleoproteinsPolycomb-Group ProteinsDNA-Binding ProteinsDNA PrimersDrosophila ProteinsNucleoproteinsph-d protein, DrosophilaPolycomb-Group ProteinsPolycomb Repressive Complex 1Repressor ProteinsSCM protein, Drosophila

Identifiers

PMID15280237
PMCPMC1470928

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.