Evidence map›Paper›PMID 15280234›Full record

ArticleGenetics2004

Association between nucleotide variation in Egfr and wing shape in Drosophila melanogaster.

Arnar Palsson, Greg Gibson

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
10.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 60 citations in OpenAlex.

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  15. Article
  16. Mutations and quantitative genetic variation: lessons from Drosophila.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2010
    Review
  17. Review
  18. Article
  19. Article
  20. Connecting QTLS to the g-matrix of evolutionary quantitative genetics.Evolution; international journal of organic evolution · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Arnar PalssonDepartment of Genetics, North Carolina State University, Raleigh, North Carolina 27695, USA.
Greg Gibson
North Carolina State University · US

Funding

QUANTITATIVE GENETIC ANALYSIS OF SIGNAL TRANSDUCTIONR01GM061600 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI GIBSON, GREGORY C · 2000 to 2008
$1.6M
NIGMS NIH HHS R01 GM61600
6 · The paper itself

Abstract

As part of an effort to dissect quantitative trait locus effects to the nucleotide level, association was assessed between 238 single-nucleotide and 20 indel polymorphisms spread over 11 kb of the Drosophila melanogaster Egfr locus and nine relative warp measures of wing shape. One SNP in a conserved potential regulatory site for a GAGA factor in the promoter of alternate first exon 2 approaches conservative experiment-wise significance (P < 0.00003) in the sample of 207 lines for association with the location of the crossveins in the central region of the wing. Several other sites indicate marginal association with one or more other aspects of shape. No strong effects of sex or population of origin were detected with measures of shape, but two different sites were strongly associated with overall wing size in interaction with these fixed factors. Whole-gene sequencing in very large samples, rather than selective genotyping, would appear to be the only strategy likely to be successful for detecting subtle associations in species with high polymorphism and little haplotype structure. However, these features severely limit the ability of linkage disequilibrium mapping in Drosophila to resolve quantitative effects to single nucleotides.

Indexed as

Genetic VariationQuantitative Trait LociAnalysis of VarianceAnimalsBase SequenceBiometryBody Weights and MeasuresDrosophila melanogasterDrosophila ProteinsErbB ReceptorsGenotypeMolecular Sequence DataNorth CarolinaPolymorphism, GeneticProtein KinasesReceptors, Invertebrate PeptideDrosophila ProteinsEgfr protein, DrosophilaErbB ReceptorsProtein KinasesReceptors, Invertebrate Peptide

Identifiers

PMID15280234
PMCPMC1470961
OpenAlexW2142733406

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.