Evidence map›Paper›PMID 15272417›Full record

ArticleAmerican journal of human genetics2004

A major lung cancer susceptibility locus maps to chromosome 6q23-25.

J E Bailey-Wilson, C I Amos, S M Pinney, G M Petersen, M de Andrade, J S Wiest, P Fain, A G Schwartz, M You, W Franklin and 17 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 118 papers, 9 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
118citing papers in PubMed, 9 pooled it
8.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

118 citing papers in PubMed, 9 syntheses or guidelines pooled it, 314 citations in OpenAlex.

  1. The Shared Genetic Architectures Between Lung Cancer and Multiple Polygenic Phenotypes in Genome-Wide Association Studies.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2021
    Pooled it
  2. Lung Cancer Screening, Version 3.2018, NCCN Clinical Practice Guidelines in Oncology.Journal of the National Comprehensive Cancer Network : JNCCN · 2018
    Guideline
  3. Pooled it
  4. Pooled it
  5. Pooled it
  6. Guideline
  7. Lung cancer screening.Journal of the National Comprehensive Cancer Network : JNCCN · 2012
    Guideline
  8. Pooled it
  9. Pooled it
  10. Putative linkage signals identified for breast cancer in African American families.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2015
    Trial
  11. Trial
  12. High-Penetrance Rare Variants Underlying Familial Lung Cancer Risk: Insights From Genetic Epidemiology of Lung Cancer Consortium.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2026
    Article
  13. Article
  14. Advances in the Basic Sciences in Thoracic Oncology in the Last 20 Years and Their Translational Impact.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2026
    Review
  15. Review
  16. Review
  17. Article
  18. The therapeutic potential of RNA m(6)A in lung cancer.Cell communication and signaling : CCS · 2024
    Review
  19. Review
  20. Article

58 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 14 institutions in 1 country.

J E Bailey-WilsonNational Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
C I Amos
S M Pinney
G M Petersen
M de Andrade
J S Wiest
P Fain
A G Schwartz
M You
W Franklin
C Klein
A Gazdar
H Rothschild
D Mandal
T Coons
J Slusser
J Lee
C Gaba
E Kupert
A Perez
X Zhou
D Zeng
Q Liu
Q Zhang
D Seminara
J Minna
M W Anderson
The University of Texas MD Anderson Cancer Center · USUniversity of Cincinnati · USMayo Clinic · USUniversity of Colorado Denver · USLouisiana State University Health Sciences Center New Orleans · USNational Cancer Institute · USNational Human Genome Research Institute · USNational Institutes of Health · USSaccomanno Higher Education Foundation · USSouthwestern Medical Center · USSouthwestern Medical CenterThe Barbara Ann Karmanos Cancer Institute · USUniversity of Toledo Medical Center · USWashington University in St. Louis · US

Funding

UNIVERSITY OF TEXAS--SPORE IN LUNG CANCERP50CA070907 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI GIBBONS, DON LYNN · 1996 to 2024
$57.4M
REPRODUCTIVE AND DEVELOPMENTAL TOXICOLOGY RESEARCHP30ES006096 · NIEHS · UNIVERSITY OF CINCINNATI · PI PINNEY, SUSAN MENGEL · 1992 to 2022
$35.4M
TARGETING EARLY CHANGES FOR NEW SCREENING STRATEGIESP50CA058184 · NCI · JOHNS HOPKINS UNIVERSITY · PI BISWAL, SHYAM · 1992 to 2013
$30.5M
X-LINKED EXTENSION OF THE REVISED HASEMAN-ELSTON ALGORITHM FOR LINKAGE ANALYSISP41RR003655 · NCRR · LOUISIANA STATE UNIV HSC NEW ORLEANS · PI ELSTON, ROBERT C. · 1987 to 2011
$11.5M
GENETIC EPIDEMIOLOGY OF LUNG CANCERU01CA076293 · NCI · UNIVERSITY OF CINCINNATI · PI ANDERSON, MARSHALL W · 1999 to 2009
$11.5M
GENETIC EPIDEMIOLOGY OF LUNG CANCERR01CA060691 · NCI · WAYNE STATE UNIVERSITY · PI SCHWARTZ, ANN G. · 1995 to 2009
$6.2M
Adenocarinoma of the Lung in WomenR01CA087895 · NCI · WAYNE STATE UNIVERSITY · PI SCHWARTZ, ANN G · 2001 to 2005
$3.0M
GENOTYPING FOR LOCATING HUMAN DISEASE GENESN01HG065403 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID L · 1996 to 2000
$1.7M
GENETICS OF HUMAN LUNG CANCERZ01HG000074 · NHGRI · HUMAN GENOME RESEARCH · PI BAILEY-WILSON, JOAN E. · 1996 to 2004
–
SURVEILLANCE, EPIDEMIOLOGY, AND END RESULTS--SEERN01CN065064 · CN · WAYNE STATE UNIVERSITY · PI WEISS, LINDA K · 1996 to 1997
–
NCI NIH HHS N01 CN065064NCI NIH HHS P50 CA058184NCI NIH HHS P50 CA070907NCI NIH HHS R01 CA060691NCI NIH HHS R01 CA087895NCI NIH HHS R01 CA60691NCI NIH HHS R01 CA637000NCI NIH HHS R01 CA87895NCI NIH HHS U01 CA076293NCI NIH HHS U01 CA76293NCRR NIH HHS P41 RR003655NCRR NIH HHS RR03655NHGRI NIH HHS N01 HG065403NHLBI NIH HHS R01 HL 71197NIEHS NIH HHS P30 ES006096NIEHS NIH HHS P30-ES06096PHS HHS P50 058187
6 · The paper itself

Abstract

Lung cancer is a major cause of death in the United States and other countries. The risk of lung cancer is greatly increased by cigarette smoking and by certain occupational exposures, but familial factors also clearly play a major role. To identify susceptibility genes for familial lung cancer, we conducted a genomewide linkage analysis of 52 extended pedigrees ascertained through probands with lung cancer who had several first-degree relatives with the same disease. Multipoint linkage analysis, under a simple autosomal dominant model, of all 52 families with three or more individuals affected by lung, throat, or laryngeal cancer, yielded a maximum heterogeneity LOD score (HLOD) of 2.79 at 155 cM on chromosome 6q (marker D6S2436). A subset of 38 pedigrees with four or more affected individuals yielded a multipoint HLOD of 3.47 at 155 cM. Analysis of a further subset of 23 multigenerational pedigrees with five or more affected individuals yielded a multipoint HLOD score of 4.26 at the same position. The 14 families with only three affected relatives yielded negative LOD scores in this region. A predivided samples test for heterogeneity comparing the LOD scores from the 23 multigenerational families with those from the remaining families was significant (P=.007). The 1-HLOD multipoint support interval from the multigenerational families extends from C6S1848 at 146 cM to 164 cM near D6S1035, overlapping a genomic region that is deleted in sporadic lung cancers as well as numerous other cancer types. Parametric linkage and variance-components analysis that incorporated effects of age and personal smoking also supported linkage in this region, but with somewhat diminished support. These results localize a major susceptibility locus influencing lung cancer risk to 6q23-25.

Indexed as

Chromosomes, Human, Pair 6Genetic Predisposition to DiseaseChromosome MappingFamily HealthGenetic LinkageGenetic MarkersGenome, HumanGenotypeHumansLod ScoreLung NeoplasmsGenetic Markers

Identifiers

PMID15272417
PMCPMC1182024
OpenAlexW2153883696

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.