Evidence map›Paper›PMID 15255898›Full record

ArticleMolecular microbiology2004

Cyclic diguanylate (c-di-GMP) regulates Vibrio cholerae biofilm formation.

Anna D Tischler, Andrew Camilli

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 253 papers.

0numbers the graph read from it
0cells of the map it votes in
253citing papers in PubMed
18.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

253 citing papers in PubMed, 502 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Discovery of Novel c-di-GMP-Related Genes inPathogens (Basel, Switzerland) · 2026
    Article
  6. Distinct PlzC mechanisms integrate chemotaxis and c-di-GMP signaling to regulateProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  7. LtrB inhibitsCurrent research in food science · 2026
    Article
  8. Identification and characterization ofFrontiers in microbiology · 2026
    Article
  9. Article
  10. Review
  11. Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Biochemistry · 2022
    Article
  20. Article

193 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Anna D TischlerDepartment of Molecular Biology and Microbiology, Tufts University School of Medicine, 136 Harrison Avenue, Boston, MA 02111, USA.
Andrew Camilli
Tufts University · US

Funding

PILOT AND FEASIBILITY STUDIESP30DK034928 · NIDDK · TUFTS MEDICAL CENTER · PI KANE, ANNE VIRGINIA · 1986 to 2007
$8.5M
STUDY OF VIBRIO INTESTINAL PHYSIOLOGY AND PATHOGENICITYR01AI045746 · NIAID · TUFTS UNIVERSITY BOSTON · PI CAMILLI, ANDREW · 2000 to 2016
$5.3M
Howard Hughes Medical InstituteNIAID NIH HHS AI45746NIAID NIH HHS R01 AI045746NIDDK NIH HHS P30 DK034928NIDDK NIH HHS P30 DK34928
6 · The paper itself

Abstract

While studying virulence gene regulation in Vibrio cholerae during infection of the host small intestine, we identified VieA as a two-component response regulator that contributes to activating expression of cholera toxin. Here we report that VieA represses transcription of Vibrio exopolysaccharide synthesis (vps) genes involved in biofilm formation by a mechanism independent of its phosphorelay and DNA-binding activities. VieA controls the intracellular concentration of the cyclic nucleotide second messenger cyclic diguanylate (c-di-GMP) using an EAL domain that functions as a c-di-GMP phosphodiesterase. Two-dimensional thin layer chromatography of nucleotide extracts confirmed that VieA reduces the concentration of c-di-GMP, opposing the action of c-di-GMP synthetase proteins. Expression of unrelated V. cholerae c-di-GMP synthetase or phosphodiesterae proteins also modulated c-di-GMP concentration and vps gene expression. We propose that c-di-GMP synthetase and phosphodiesterase domain-containing proteins contribute to regulating biofilm formation by controlling c-di-GMP concentration.

Indexed as

BiofilmsCyclic GMPEscherichia coliGene Expression Regulation, BacterialGenotypeHomeostasisMicroscopy, ConfocalPhenotypePlasmidsPolysaccharides, BacterialRibonucleasesVibrio choleraebis(3',5')-cyclic diguanylic acidCyclic GMPPolysaccharides, BacterialRibonucleases

Identifiers

PMID15255898
PMCPMC2790424
OpenAlexW2146429915

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.