Evidence map›Paper›PMID 15254244›Full record

ArticleMolecular and cellular biology2004

Global mRNA stabilization preferentially linked to translational repression during the endoplasmic reticulum stress response.

Tomoko Kawai, Jinshui Fan, Krystyna Mazan-Mamczarz, Myriam Gorospe

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 87 citations in OpenAlex.

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  6. Histone H3 lysine 4 methylation signature associated with human undernutrition.Proceedings of the National Academy of Sciences of the United States of America · 2018
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  9. Autogenous cross-regulation ofGenes & development · 2017
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  10. TIA-1 Is a Functional Prion-Like Protein.Cold Spring Harbor perspectives in biology · 2017
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  11. Article
  12. Boric acid induces cytoplasmic stress granule formation, eIF2α phosphorylation, and ATF4 in prostate DU-145 cells.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2015
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  16. Molecular pathways: emerging roles of mammalian Sirtuin SIRT7 in cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2014
    Article
  17. Review
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  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Tomoko KawaiBox 12, Laboratory of Cellular and Molecular Biology, National Institute on Aging-IRP, National Institutes of Health, 5600 Nathan Shock Drive, Baltimore, MD 21224-6825, USA.
Jinshui Fan
Krystyna Mazan-Mamczarz
Myriam Gorospe
Institute on Aging · USNational Institute on Aging · US

Funding

Post-transcriptional Regulation Of Proliferative and Stress Response GenesZIAAG000511 · NIA · NATIONAL INSTITUTE ON AGING · PI GOROSPE, MYRIAM · 2009 to 2025
$25.4M
Post-transcriptional Regulation Of Proliferative and Stress Response GenesZ01AG000511 · NIA · NATIONAL INSTITUTE ON AGING · PI GOROSPE, MYRIAM NONE · 1998 to 2008
$1.6M
6 · The paper itself

Abstract

The stability of mRNAs undergoing translation has long been a controversial question. Here, we systematically investigate links between mRNA turnover and translation during the endoplasmic reticulum (ER) stress response, a process during which protein synthesis is potently regulated. cDNA array-based approaches to assess the stability and translational status of each mRNA were devised. First, ER stress-triggered changes in mRNA stability were studied by comparing differences in steady-state mRNA levels with differences in gene transcription. Second, changes in translational status were monitored by studying ER stress-induced shifts in the relative distribution of each mRNA along sucrose gradients. Together, the array-derived data reveal complex links between mRNA stability and translation, with all regulatory groups represented: both stabilized and destabilized mRNAs were found among translationally induced as well as translationally suppressed mRNA collections. Remarkably, however, the subset of stabilized mRNAs was prominently enriched in translationally suppressed transcripts, suggesting that ER stress was capable of causing the stabilization of mRNAs associated with a global reduction in protein synthesis. The cDNA array-based approach described here can be applied to global analyses of mRNA turnover and translation and can serve to investigate subsets of mRNAs subject to joint posttranscriptional control.

Indexed as

Protein BiosynthesisBlotting, NorthernBlotting, WesternCell Line, TumorCentrifugation, Density GradientDactinomycinDNA, ComplementaryDose-Response Relationship, DrugEndoplasmic ReticulumHeLa CellsHumansNucleic Acid ConformationOligonucleotide Array Sequence AnalysisPolyribosomesRNA, MessengerRNA Processing, Post-TranscriptionalDactinomycinDNA, ComplementaryRNA, MessengerSucrose

Identifiers

PMID15254244
PMCPMC444849
OpenAlexW2082565048

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.