Evidence map›Paper›PMID 15252757›Full record

ArticleAmerican journal of human genetics2004

Genomewide scan for gout in taiwanese aborigines reveals linkage to chromosome 4q25.

Li Shu-Chuan Cheng, Shang-Lun Chiang, Hung-Pin Tu, Shun-Jen Chang, Tsu-Nai Wang, Allen Min-Jen Ko, Ranajit Chakraborty, Ying-Chin Ko

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 67 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Gain-of-function mutations inAnnals of the rheumatic diseases · 2022
    Article
  4. Review
  5. Review
  6. Interaction of Alcohol Consumption andJournal of personalized medicine · 2021
    Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. ALPK1 genetic regulation and risk in relation to gout.International journal of epidemiology · 2013
    Article
  15. Article
  16. Article
  17. Article
  18. Gout in the Hmong in the United States.Journal of clinical rheumatology : practical reports on rheumatic & musculoskeletal diseases · 2010
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 3 countries.

Li Shu-Chuan ChengDivision of Information Science, City of Hope Medical Center, Duarte, CA, USA.
Shang-Lun Chiang
Hung-Pin Tu
Shun-Jen Chang
Tsu-Nai Wang
Allen Min-Jen Ko
Ranajit Chakraborty
Ying-Chin Ko
National Health Research Institutes · TWCity Of Hope National Medical Center · USKaohsiung Medical University · TWUniversity of Cincinnati · USUNSW Sydney · AU

Funding

X-LINKED EXTENSION OF THE REVISED HASEMAN-ELSTON ALGORITHM FOR LINKAGE ANALYSISP41RR003655 · NCRR · LOUISIANA STATE UNIV HSC NEW ORLEANS · PI ELSTON, ROBERT C. · 1987 to 2011
$11.5M
MAMMALIAN GENOTYPING SERVICEN01HV048141 · HV · MARSHFIELD CLINIC RESEARCH FOUNDATION · PI WEBER, JAMES L. · 1994 to 2000
$3.1M
NCRR NIH HHS P41 RR003655NCRR NIH HHS RR03655NHLBI NIH HHS HV48141NHLBI NIH HHS N01 HV048141
6 · The paper itself

Abstract

Gout is a disorder of uric-acid metabolism. The Pacific Austronesian population, including Taiwanese aborigines, has a remarkably high prevalence of hyperuricemia and gout, which suggests a founder effect across the Pacific region. We report here a genomewide linkage study of 21 multiplex pedigrees with gout from an aboriginal tribe in Taiwan. From observations of familial clustering, early onset of gout, and clinically severe manifestations, we hypothesized that a major gene plays a role in this trait. Using 382 random polymorphic markers spread across 22 autosomes, we demonstrated a highly significant linkage for gout at marker D4S2623 on chromosome 4q25 (P=.0002 by nonparametric linkage [the NPL(all) statistic]; empirical P=.0006; LOD=4.3, P=4.4x10-6 by logistic regression). When alcohol consumption was included as a covariate in the model, the LOD score increased to 5.66 (P=1.3x10-6). Quantitative traits, including serum uric acid and creatinine, also showed a moderate linkage to this region. To our knowledge, this is the first genome-scan report to identify a genetic locus harboring a gout-susceptibility gene.

Indexed as

Chromosomes, Human, Pair 4Genetic LinkageGenome, HumanAdultFamily HealthFounder EffectGenetic MarkersGenetic Predisposition to DiseaseGoutHumansHyperuricemiaLod ScoreMiddle AgedModels, GeneticPedigreePolymorphism, GeneticGenetic Markers

Identifiers

PMID15252757
PMCPMC1182028
OpenAlexW1972472517

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.