Evidence map›Paper›PMID 15249668›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2004

Drs2p-coupled aminophospholipid translocase activity in yeast Golgi membranes and relationship to in vivo function.

Paramasivam Natarajan, Jiyi Wang, Zhaolin Hua, Todd R Graham

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 192 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Lipid Transport byInfection and immunity · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. P-Type ATPase Apt1 of the Fungal PathogenJournal of fungi (Basel, Switzerland) · 2021
    Article
  13. Article
  14. Article
  15. Conserved mechanism of phospholipid substrate recognition by the P4-ATPase Neo1 from Saccharomyces cerevisiae.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2020
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review

39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Paramasivam NatarajanDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37235-1634, USA.
Jiyi Wang
Zhaolin Hua
Todd R Graham
University of California, Berkeley · USVanderbilt University · US

Funding

Drs2p Function in Clathrin-coated Vesicle BuddingR01GM062367 · NIGMS · VANDERBILT UNIVERSITY · PI GRAHAM, TODD R · 2001 to 2013
$3.4M
NIGMS NIH HHS GM-62367NIGMS NIH HHS R01 GM062367
6 · The paper itself

Abstract

Aminophospholipid translocases (APLTs) are defined primarily by their ability to flip fluorescent or spin-labeled derivatives of phosphatidylserine (PS) and phosphatidylethanolamine (PE) from the external leaflet of a membrane bilayer to the cytosolic leaflet and are thought to establish phospholipid asymmetry in biological membranes. The identities of APLTs remain unknown, although candidate proteins include the Drs2p/ATPase II subfamily of P-type ATPases. Drs2p from budding yeast localizes to the trans-Golgi network (TGN), and here we show that this membrane contains an ATP-dependent APLT that flips 7-nitro-2-1,3-benzoxadiazol-4-yl (NBD) PS and PE derivatives from the luminal to the cytosolic leaflet. To assess the contribution of Drs2p to this activity, TGN membranes were prepared from strains harboring WT or temperature-sensitive alleles of DRS2 and null alleles of three other potential APLT genes (DNF1, DNF2, and DNF3). Assay of these membranes indicated that Drs2p was required for the ATP-dependent translocation of NBD-PS, whereas no active translocation of NBD-PE or NBD-phosphatidylcholine was detected. The specificity of Drs2p for NBD-PS suggested that translocation of PS would be required for the function of Drs2p in protein transport from the TGN. However, cho1 yeast strains that are unable to synthesize PS do not phenocopy drs2 but instead transport proteins normally via the secretory pathway. In addition, a drs2 cho1 double mutant retains drs2 transport defects. Therefore, whereas NBD-PS is a preferred substrate for Drs2p in vitro, endogenous PS is not an obligatory substrate in vivo for the role Drs2p plays in protein transport.

Indexed as

Phospholipid Transfer Proteins4-Chloro-7-nitrobenzofurazanBiological TransportCalcium-Transporting ATPasesCarrier ProteinsGolgi ApparatusIntracellular MembranesMembrane LipidsMembrane ProteinsPhosphatidylethanolaminesPhosphatidylserinesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTemperaturetrans-Golgi NetworkTransport Vesicles4-Chloro-7-nitrobenzofurazanCalcium-Transporting ATPasesCarrier ProteinsDRS2 protein, S cerevisiaeMembrane LipidsMembrane ProteinsPhosphatidylethanolaminesPhosphatidylserinesPhospholipid Transfer ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID15249668
PMCPMC489982
OpenAlexW1989126866

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.