Evidence map›Paper›PMID 15247374›Full record

ArticlePlant physiology2004

Evolution and function of the sucrose-phosphate synthase gene families in wheat and other grasses.

C Kate Castleden, Naohiro Aoki, Vanessa J Gillespie, Elspeth A MacRae, W Paul Quick, Peter Buchner, Christine H Foyer, Robert T Furbank, John E Lunn

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
7.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 146 citations in OpenAlex.

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  7. Genome-Wide Identification ofInternational journal of molecular sciences · 2023
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  8. Dynamics of the sucrose metabolism and related gene expression in tomato fruits under water deficit.Physiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Article
  9. Article
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  14. Article
  15. Article
  16. Article
  17. Review
  18. Sulfuric Acid and Gibberellic Acid (GAThe protein journal · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

C Kate CastledenCrop Performance and Improvement Division, Rothamsted-Research, Harpenden, Hertfordshire AL5 2JQ, United Kingdom.
Naohiro Aoki
Vanessa J Gillespie
Elspeth A MacRae
W Paul Quick
Peter Buchner
Christine H Foyer
Robert T Furbank
John E Lunn
Plant Industry · AUACT GovernmentCommonwealth Scientific and Industrial Research Organisation · AUAgResearch · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Suc-phosphate synthase (SPS) is a key regulatory enzyme in the pathway of Suc biosynthesis and has been linked to quantitative trait loci controlling plant growth and yield. In dicotyledonous plants there are three SPS gene families: A, B, and C. Here we report the finding of five families of SPS genes in wheat (Triticum aestivum) and other monocotyledonous plants from the family Poaceae (grasses). Three of these form separate subfamilies within the previously described A, B, and C gene families, but the other two form a novel and distinctive D family, which on present evidence is only found in the Poaceae. The D-type SPS proteins lack the phosphorylation sites associated with 14-3-3 protein binding and osmotic stress activation, and the linker region between the N-terminal catalytic glucosyltransferase domain and the C-terminal Suc-phosphatase-like domain is 80 to 90 amino acid residues shorter than in the A, B, or C types. The D family appears to have arisen after the divergence of mono- and dicotyledonous plants, with a later duplication event resulting in the two D-type subfamilies. Each of the SPS gene families in wheat showed different, but overlapping, spatial and temporal expression patterns, and in most organs at least two different SPS genes are expressed. Analysis of expressed sequence tags indicated similar expression patterns to wheat for each SPS gene family in barley (Hordeum vulgare) but not in more distantly related grasses. We identified an expressed sequence tag from rice (Oryza sativa) that appears to be derived from an endogenous antisense SPS gene, and this might account for the apparently low level of expression of the related OsSPS11 sense gene, adding to the already extensive list of mechanisms for regulating the activity of SPS in plants.

Indexed as

Amino Acid SequenceBase SequenceDNA PrimersEvolution, MolecularGlucosyltransferasesMolecular Sequence DataMultigene FamilyOryzaPeptide FragmentsPhylogenyPlant ProteinsPoaceaeTriticumZea maysDNA PrimersGlucosyltransferasesPeptide FragmentsPlant Proteinssucrose-phosphate synthase

Identifiers

PMID15247374
PMCPMC519087
OpenAlexW2131109651

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.