Evidence map›Paper›PMID 15243064›Full record

ArticleJournal of clinical microbiology2004

Comparative evaluation of the new version of the INNO-LiPA Mycobacteria and genotype Mycobacterium assays for identification of Mycobacterium species from MB/BacT liquid cultures artificially inoculated with Mycobacterial strains.

Eduardo Padilla, Victoria González, Jose María Manterola, Andrés Pérez, María Dolores Quesada, Sergio Gordillo, Cristina Vilaplana, María Angeles Pallarés, Sonia Molinos, María Dolores Sánchez and 1 more

Abstract readComparative Study
In one paragraph

Article in Journal of clinical microbiology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Guideline
  2. Article
  3. Review
  4. Article
  5. Biochip-Based Identification of Mycobacterial Species in Russia.International journal of molecular sciences · 2024
    Article
  6. Review
  7. Misidentification ofJournal of clinical tuberculosis and other mycobacterial diseases · 2021
    Article
  8. Article
  9. Evaluation of Genotype MTBDRFrontiers in microbiology · 2018
    Article
  10. A Case of False-PositiveCase reports in infectious diseases · 2016
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Evaluation of INNO-LiPA mycobacteria v2 assay for identification of rapidly growing mycobacteria.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2011
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Eduardo PadillaServicio de Microbiología, Departamento de Genética y Microbiología, Hospital Universitario Germans Trias i Pujol, Universidad Autónoma de Barcelona, Ctra. del Canyet s/n, 08916 Badalona, Barcelona, Spain. epadilla.@ns.hugtip.scs.es
Victoria González
Jose María Manterola
Andrés Pérez
María Dolores Quesada
Sergio Gordillo
Cristina Vilaplana
María Angeles Pallarés
Sonia Molinos
María Dolores Sánchez
Vicente Ausina

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The performance of two DNA line probe assays, a new version of INNO-LiPA Mycobacteria (Innogenetics, Ghent, Belgium) and the GenoType Mycobacterium (Hain Diagnostika, Nehren, Germany), were evaluated for identification of mycobacterial species isolated from liquid cultures. Both tests are based on a PCR technique and designed for simultaneous identification of different mycobacterial species by reverse hybridization and line probe technology. The INNO-LiPA Mycobacteria v2 targeting the 16S-23S rRNA gene spacer region was developed for the simultaneous identification of 16 different mycobacterial species. The GenoType Mycobacterium, which targets the 23S rRNA gene, allows simultaneous identification of 13 mycobacterial species. Both tests were evaluated on 110 mycobacterial strains belonging to 22 different mycobacterial species (20 reference strains, 83 clinical strains, and 4 Mycobacterium kansasii strains isolated from tap water) that were previously inoculated into MB/BacT bottles. The sensitivity of both methods, defined as the number of positive results obtained with the Mycobacterium genus probe together with an interpretable result on the number of samples tested was 110 of 110 (100%) for INNO-LiPA and 102 of 110 (92.7%) for GenoType. For samples with interpretable results, INNO-LiPA was able to correctly identify 109 of 110 samples (99.1%), whereas the GenoType correctly identified 100 of 102 samples (98.0%). Both tests were easy to perform, rapid, and reliable when applied to mycobacterial identification directly from MB/BacT bottles.

Indexed as

DNA, Ribosomal SpacerGenotypeMycobacteriumNucleic Acid Amplification TechniquesReagent StripsRNA, Ribosomal, 16SRNA, Ribosomal, 23SSensitivity and SpecificityDNA, Ribosomal SpacerReagent StripsRNA, Ribosomal, 16SRNA, Ribosomal, 23S

Identifiers

PMID15243064
PMCPMC446295

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.