Evidence map›Paper›PMID 15242348›Full record

ArticleThe Biochemical journal2004

Inositol phospholipids regulate the guanine-nucleotide-exchange factor Tiam1 by facilitating its binding to the plasma membrane and regulating GDP/GTP exchange on Rac1.

Ian N Fleming, Ian H Batty, Alan R Prescott, Alex Gray, Gursant S Kular, Hazel Stewart, C Peter Downes

Abstract read
In one paragraph

Article in The Biochemical journal, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. High-resolution structure of the Tiam1 PHn-CC-Ex domain.Acta crystallographica. Section F, Structural biology and crystallization communications · 2013
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. SynGAP regulates steady-state and activity-dependent phosphorylation of cofilin.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2008
    Article
  17. Article
  18. Article
  19. Neurotrophin-dependent dendritic filopodial motility: a convergence on PI3K signaling.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2008
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Ian N FlemingDivision of Signal Transduction, School of Life Sciences, University of Dundee, Dundee, Scotland DD1 5EH, UK.
Ian H Batty
Alan R Prescott
Alex Gray
Gursant S Kular
Hazel Stewart
C Peter Downes
University of Dundee · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Binding of the Rac1-specific guanine-nucleotide-exchange factor, Tiam1, to the plasma membrane requires the N-terminal pleckstrin homology domain. In the present study, we show that membrane-association is mediated by binding of PtdIns(4,5)P(2) to the pleckstrin homology domain. Moreover, in 1321N1 astrocytoma cells, translocation of Tiam1 to the cytosol, following receptor-mediated stimulation of PtdIns(4,5)P(2) breakdown, correlates with decreased Rac1-GTP levels, indicating that membrane-association is required for GDP/GTP exchange on Rac1. In addition, we show that platelet-derived growth factor activates Rac1 in vivo by increasing PtdIns(3,4,5)P(3) concentrations, rather than the closely related lipid, PtdIns(3,4)P(2). Finally, the data demonstrate that PtdIns(4,5)P(2) and PtdIns(3,4,5)P(3) bind to the same pleckstrin homology domain in Tiam1 and that soluble inositol phosphates appear to compete with lipids for this binding. Together, these novel observations provide strong evidence that distinct phosphoinositides regulate different functions of this enzyme, indicating that local concentrations of signalling lipids and the levels of cytosolic inositol phosphates will play crucial roles in determining its activity in vivo.

Indexed as

AndrostadienesCell Line, TumorCell MembraneCytosolGuanine Nucleotide Exchange FactorsGuanosine DiphosphateGuanosine TriphosphateHumansPeptide FragmentsPhosphatidylinositol 4,5-DiphosphatePhosphatidylinositol PhosphatesPhosphoinositide-3 Kinase InhibitorsPlatelet-Derived Growth FactorProtein BindingProteinsProtein Structure, TertiaryAndrostadienesGuanine Nucleotide Exchange FactorsGuanosine DiphosphateGuanosine TriphosphatePeptide Fragmentsphosphatidylinositol 3,4,5-triphosphatePhosphatidylinositol 4,5-DiphosphatePhosphatidylinositol Phosphatesphosphatidylinositol receptorsPhosphoinositide-3 Kinase InhibitorsPlatelet-Derived Growth FactorProteinsrac1 GTP-Binding ProteinReceptors, Cytoplasmic and NuclearRecombinant Fusion ProteinsThrombinthrombin receptor peptide (42-47)TIAM1 protein, humanT-Lymphoma Invasion and Metastasis-inducing Protein 1Wortmannin

Identifiers

PMID15242348
PMCPMC1133961
OpenAlexW2006037334

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.