Evidence map›Paper›PMID 15242347›Full record

ArticleThe Biochemical journal2004

A crustacean Ca2+-binding protein with a glutamate-rich sequence promotes CaCO3 crystallization.

Hirotoshi Endo, Yasuaki Takagi, Noriaki Ozaki, Toshihiro Kogure, Toshiki Watanabe

Abstract read
In one paragraph

Article in The Biochemical journal, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. A gastrolith protein serving a dual role in the formation of an amorphous mineral containing extracellular matrix.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Hirotoshi EndoDepartment of Marine Bioscience, Ocean Research Institute, The University of Tokyo, Tokyo, Japan.
Yasuaki Takagi
Noriaki Ozaki
Toshihiro Kogure
Toshiki Watanabe

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The DD4 mRNA of the penaeid prawn Penaeus japonicus was shown previously to be expressed in the epidermis adjacent to the exoskeleton specifically during the post-moult period, when calcification of the exoskeleton took place. The encoded protein possessed a Ca2+-binding site, suggesting its involvement in the calcification of the exoskeleton. In the present study, an additional ORF (open reading frame) of 289 amino acids was identified at the 5' end of the previous ORF. The newly identified part of the encoded protein included a region of approx. 120 amino acids that was highly rich in glutamate residues, and contained one or more Ca2+-binding sites. In an immunohistochemical study, signals were detected within calcified regions in the endocuticular layer of the exoskeleton. Bacterially expressed partial segments of the protein induced CaCO3 crystallization in vitro. Finally, a reverse transcription-PCR study showed that the expression was limited to an early part of the post-moult period, preceding significant calcification of the exoskeleton. These observations argue for the possibility that the encoded protein, renamed crustocalcin (CCN), promotes formation of CaCO3 crystals in the exoskeleton by inducing nucleation.

Indexed as

Amino Acid SequenceAnimalsBase SequenceBlotting, WesternCalcification, PhysiologicCalcium-Binding ProteinsCalcium CarbonateCalcium RadioisotopesDNA, ComplementaryGlutamic AcidImmunohistochemistryMolecular Sequence DataMolecular WeightNucleic Acid Amplification TechniquesOpen Reading FramesPenaeidaeCalcium-Binding ProteinsCalcium CarbonateCalcium RadioisotopesDD4 protein, Penaeus japonicusDNA, ComplementaryGlutamic Acid

Identifiers

PMID15242347
PMCPMC1134099

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.