Evidence map›Paper›PMID 15240501›Full record

ArticleBiophysical journal2004

Structure of (KIAGKIA)3 aggregates in phospholipid bilayers by solid-state NMR.

Orsolya Toke, R D O'Connor, Thomas K Weldeghiorghis, W Lee Maloy, Ralf W Glaser, Anne S Ulrich, Jacob Schaefer

Erratum issuedAbstract read
In one paragraph

Article in Biophysical journal, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. REDOR NMR for drug discovery.Bioorganic & medicinal chemistry letters · 2013
    Article
  8. Article
  9. Article
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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

7 authors.

Orsolya TokeDepartment of Chemistry, Washington University, St. Louis, Missouri 63130, USA.
R D O'Connor
Thomas K Weldeghiorghis
W Lee Maloy
Ralf W Glaser
Anne S Ulrich
Jacob Schaefer

Funding

Structure of Proteins in Cell Walls by REDOR NMRR01EB002058 · NIBIB · WASHINGTON UNIVERSITY · PI SCHAEFER, JACOB · 2003 to 2013
$3.2M
NIBIB NIH HHS EB02058NIBIB NIH HHS R01 EB002058
6 · The paper itself

Abstract

The interchain (13)C-(19)F dipolar coupling measured in a rotational-echo double-resonance (REDOR) experiment performed on mixtures of differently labeled KIAGKIA-KIAGKIA-KIAGKIA (K3) peptides (one specifically (13)C labeled, and the other specifically (19)F labeled) in multilamellar vesicles of dipalmitoylphosphatidylcholine and dipalmitoylphosphatidylglycerol (1:1) shows that K3 forms close-packed clusters, primarily dimers, in bilayers at a lipid/peptide molar ratio (L/P) of 20. Dipolar coupling to additional peptides is weaker than that within the dimers, consistent with aggregates of monomers and dimers. Analysis of the sideband dephasing rates indicates a preferred orientation between the peptide chains of the dimers. The combination of the distance and orientation information from REDOR is consistent with a parallel (N-N) dimer structure in which two K3 helices intersect at a cross-angle of approximately 20 degrees. Static (19)F NMR experiments performed on K3 in oriented lipid bilayers show that between L/P = 200 and L/P = 20, K3 chains change their absolute orientation with respect to the membrane normal. This result suggests that the K3 dimers detected by REDOR at L/P = 20 are not on the surface of the bilayer but are in a membrane pore.

Indexed as

Models, MolecularPeptides1,2-DipalmitoylphosphatidylcholineAmino Acid SequenceAnti-Bacterial AgentsDimerizationIsotope LabelingLipid BilayersMagnetic Resonance SpectroscopyMolecular ConformationMolecular Sequence DataPhospholipids1,2-DipalmitoylphosphatidylcholineAnti-Bacterial AgentsLipid BilayersPeptidesPhospholipids

Identifiers

PMID15240501
PMCPMC1304391

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.