Evidence map›Paper›PMID 15236230›Full record

ArticleThe Journal of comparative neurology2004

Expression of calcium transporters in the retina of the tiger salamander (Ambystoma tigrinum).

David Krizaj, Xiaorong Liu, David R Copenhagen

Open access · greenAbstract read
In one paragraph

Article in The Journal of comparative neurology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Store-Operated Calcium Entry in Müller Glia Is Controlled by Synergistic Activation of TRPC and Orai Channels.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2016
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Calcium stores in vertebrate photoreceptors.Advances in experimental medicine and biology · 2012
    Review
  11. Review
  12. Review
  13. Article
  14. Review
  15. Article
  16. Scotopic visual signaling in the mouse retina is modulated by high-affinity plasma membrane calcium extrusion.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2006
    Article
  17. Article
  18. Compartmentalization of calcium entry pathways in mouse rods.The European journal of neuroscience · 2005
    Article
  19. Serca isoform expression in the mammalian retina.Experimental eye research · 2005
    Article
  20. Synaptic transmission at retinal ribbon synapses.Progress in retinal and eye research · 2005
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

David KrizajDepartment of Ophthalmology, University of California, San Francisco, School of Medicine, San Francisco, California 94143-0730, USA. krizaj@phy.ucsf.edu
Xiaorong Liu
David R Copenhagen
University of California, San Francisco · US

Funding

SYNAPTIC INTERACTIONS AND PROCESSES IN THE RETINAR01EY001869 · NEI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI COPENHAGEN, DAVID RICHARD · 1985 to 2013
$3.9M
REGULATION OF NEUROTRANSMISSION IN THE RETINAR01EY013870 · NEI · UNIVERSITY OF UTAH · PI KRIZAJ, DAVID · 2002 to 2011
$2.7M
SYNAPTIC INTERACTIONS AND MECHANISMS IN THE RETINAR37EY001869 · NEI · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI COPENHAGEN, DAVID RICHARD · 1993 to 2002
$1.0M
NEI NIH HHS EY 01869NEI NIH HHS EY 13870NEI NIH HHS R01 EY001869NEI NIH HHS R01 EY013870NEI NIH HHS R37 EY001869
6 · The paper itself

Abstract

Changes in intracellular calcium concentration, [Ca2+]i, modulate the flow of visual signals across all stages of processing in the retina, yet the identities of Ca2+ transporters responsible for these changes are still largely unknown. In the current study, the distribution of plasma membrane and intracellular Ca2+ transporters in the retina of tiger salamander, a model system for physiological studies of retinal function, was determined. Plasma membrane calcium ATPases (PMCAs), responsible for high-affinity Ca2+ extrusion, were highly expressed in the salamander retina. PMCA isoforms 1, 2, and 4 were localized to photoreceptors, whereas the inner retina expressed all four isoforms. PMCA3 was expressed in a sparse population of amacrine and ganglion neurons, whereas PMCA2 was expressed in most amacrine and ganglion cells. Na+/Ca2+ exchangers, a high-capacity Ca2+ extrusion system, were expressed in the outer plexiform layer and in a subset of inner nuclear and ganglion layer cells. Intracellular Ca2+ store transporters were also represented prominently. SERCA2a, a splice variant of the sarcoplasmic-endoplasmic Ca2+ ATPase, was found mostly in photoreceptors, whereas SERCA2b was found in the majority of retinal neurons and in glial cells. The predominant endoplasmic reticulum (ER) Ca2+ channels in the salamander retina are represented by the isoform 2 of the IP3 receptor family and the isoform 2 of the ryanodine receptor family. These results indicate that Ca2+ transporters in the salamander retina are expressed in a cell type-specific manner.

Indexed as

AmbystomaAnimalsBlotting, WesternCalcium ChannelsCalcium-Transporting ATPasesCell MembraneImage Processing, Computer-AssistedImmunohistochemistryIntracellular FluidIsoenzymesMicroscopy, ConfocalPhotoreceptor CellsRetinaSodium-Calcium ExchangerCalcium ChannelsCalcium-Transporting ATPasesIsoenzymesSodium-Calcium Exchanger

Identifiers

PMID15236230
PMCPMC2579895
OpenAlexW2165971749

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.