Evidence map›Paper›PMID 15231815›Full record

ArticleJournal of bacteriology2004

Loop deletions indicate regions important for FhuA transport and receptor functions in Escherichia coli.

Franziska Endriss, Volkmar Braun

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 62 citations in OpenAlex.

  1. Overview of Phage Defense Systems in Bacteria and Their Applications.International journal of molecular sciences · 2024
    Review
  2. Article
  3. Article
  4. Article
  5. Structural basis for host recognition and superinfection exclusion by bacteriophage T5.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  6. Review
  7. Article
  8. The Biology of Colicin M and Its Orthologs.Antibiotics (Basel, Switzerland) · 2021
    Review
  9. Article
  10. Article
  11. Article
  12. Screening of Polyvalent Phage-ResistantFrontiers in microbiology · 2019
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Detergent-mediated incorporation of transmembrane proteins in giant unilamellar vesicles with controlled physiological contents.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  18. Article
  19. Redesign of a plugged beta-barrel membrane protein.The Journal of biological chemistry · 2011
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Franziska EndrissMikrobiologie/Membranphysiologie, Universität Tübingen, Tübingen, Germany.
Volkmar Braun
University of Tübingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Precise deletions of cell surface-exposed loops of FhuA resulted in mutants of Escherichia coli with distinct phenotypes. Deletion of loop 3 or 11 inactivated ferrichrome transport activity. Deletion of loop 8 inactivated receptor activity for colicin M and the phages T1, T5, and phi80. The loop 7 deletion mutant was colicin M resistant but fully phage sensitive. The loop 4 deletion mutant was resistant to the TonB-dependent phages T1 and phi80 but fully sensitive to the TonB-independent phage T5. The phenotypes of the deletion mutants revealed important sites for the multiple FhuA transport and receptor activities. The ligand binding sites are nonidentical and are distributed among the entire exposed surface. Presumably, FhuA evolved as a ferrichrome transporter and was subsequently used as a receptor by the phages and colicin M, which selected the same as well as distinct loops as receptor sites.

Indexed as

Sequence DeletionAmino Acid SequenceBacterial Outer Membrane ProteinsBacterial ProteinsBinding SitesBiological TransportColicinsColiphagesEscherichia coliEscherichia coli ProteinsFerrichromeLigandsMembrane ProteinsMembrane Transport ProteinsModels, MolecularMolecular Sequence DataBacterial Outer Membrane ProteinsBacterial ProteinsColicinsEscherichia coli ProteinsFerrichromeFhuA protein, E coliLigandsMembrane ProteinsMembrane Transport ProteinsReceptors, VirustonB protein, BacteriatonB protein, E coli

Identifiers

PMID15231815
PMCPMC438571
OpenAlexW2090880221

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.