Evidence map›Paper›PMID 15226432›Full record

ArticleMolecular and cellular biology2004

Interferon regulatory factor 1 (IRF-1) and IRF-2 distinctively up-regulate gene expression and production of interleukin-7 in human intestinal epithelial cells.

Shigeru Oshima, Tetsuya Nakamura, Shin Namiki, Eriko Okada, Kiichiro Tsuchiya, Ryuichi Okamoto, Motomi Yamazaki, Takanori Yokota, Masatoshi Aida, Yuki Yamaguchi and 3 more

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 146 citations in OpenAlex.

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  18. Genetic Regulation of Immunoglobulin G Glycosylation.Experientia supplementum (2012) · 2021
    Article
  19. Review
  20. Interleukin (IL)-7 Signaling in the Tumor Microenvironment.Advances in experimental medicine and biology · 2021
    Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Shigeru OshimaDepartment of Gastroenterology and Hepatology, Graduate School, Tokyo Medical and Dental University, 1-5-45 Yushima, Bunkyo-ku, Tokyo 113-8519, Japan.
Tetsuya Nakamura
Shin Namiki
Eriko Okada
Kiichiro Tsuchiya
Ryuichi Okamoto
Motomi Yamazaki
Takanori Yokota
Masatoshi Aida
Yuki Yamaguchi
Takanori Kanai
Hiroshi Handa
Mamoru Watanabe
Tokyo Institute of Technology · JPTokyo Medical and Dental University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intestinal epithelial cell-derived interleukin (IL)-7 functions as a pleiotropic and nonredundant cytokine in the human intestinal mucosa; however, the molecular basis of its production has remained totally unknown. We here showed that human intestinal epithelial cells both constitutively and when induced by gamma interferon (IFN-gamma) produced IL-7, while several other factors we tested had no effect. Transcriptional regulation via an IFN regulatory factor element (IRF-E) on the 5' flanking region, which lacks canonical core promoter sequences, was pivotal for both modes of IL-7 expression. IRF-1 and IRF-2, the latter of which is generally known as a transcriptional repressor, were shown to interact with IRF-E and transactivate IL-7 gene expression in an IFN-gamma-inducible and constitutive manner, respectively. Indeed, tetracycline-inducible expression experiments revealed that both of these IRF proteins up-regulated IL-7 protein production, and their exclusive roles were further confirmed by small interfering RNA-mediated gene silencing systems. Moreover, these IRFs displayed distinct properties concerning the profile of IL-7 transcripts upon activation and expression patterns within human colonic epithelial tissues. These results suggest that the functional interplay between IRF-1 and IRF-2 serves as an elaborate and cooperative mechanism for timely as well as continuous regulation of IL-7 production that is essential for local immune regulation within human intestinal mucosa.

Indexed as

Gene Expression RegulationUp-Regulation5' Untranslated RegionsAnimalsBase SequenceCell Line, TumorDNA-Binding ProteinsEpithelial CellsGenes, ReporterHumansInterferon-gammaInterferon Regulatory Factor-1Interferon Regulatory Factor-2Interleukin-1Interleukin-7Intestinal Mucosa5' Untranslated RegionsDNA-Binding ProteinsInterferon-gammaInterferon Regulatory Factor-1Interferon Regulatory Factor-2Interleukin-1Interleukin-7IRF1 protein, humanIRF2 protein, humanPhosphoproteinsRepressor ProteinsRNA, Small InterferingTranscription FactorsTransforming Growth Factor alphaTransforming Growth Factor beta

Identifiers

PMID15226432
PMCPMC434253
OpenAlexW2155176680

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.