Evidence map›Paper›PMID 15226422›Full record

ArticleMolecular and cellular biology2004

mRNA capping enzyme activity is coupled to an early transcription elongation.

Hye-Jin Kim, Seok-Ho Jeong, Jeong-Hwa Heo, Su-Jin Jeong, Seong-Tae Kim, Hong-Duk Youn, Jeong-Whan Han, Hyang-Woo Lee, Eun-Jung Cho

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Sequestering the 5'-cap for viral RNA packaging.BioEssays : news and reviews in molecular, cellular and developmental biology · 2022
    Article
  4. Structures of theJournal of virology · 2020
    Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. RNA processing and export.Cold Spring Harbor perspectives in biology · 2010
    Review
  13. Article
  14. Regulation of mRNA cap methylation.The Biochemical journal · 2009
    Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Human capping enzyme promotes formation of transcriptional R loops in vitro.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Hye-Jin KimDepartment of Biochemistry and Molecular Biology, College of Pharmacy, Sungkyunkwan University, Suwon, Kyonggi-do 440-746, South Korea.
Seok-Ho Jeong
Jeong-Hwa Heo
Su-Jin Jeong
Seong-Tae Kim
Hong-Duk Youn
Jeong-Whan Han
Hyang-Woo Lee
Eun-Jung Cho
Sungkyunkwan University · KRSeoul National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

One of the temperature-sensitive alleles of CEG1, a guanylyltransferase subunit of the Saccharomyces cerevisiae capping enzyme, showed 6-azauracil (6AU) sensitivity at the permissive growth temperature, which is a phenotype that is correlated with a transcription elongation defect. This temperature-sensitive allele, ceg1-63, has an impaired ability to induce PUR5 in response to 6AU treatment and diminished enzyme-GMP formation activity. However, this cellular and molecular defect is not primarily due to the preferential degradation of the transcript attributed to a lack of cap structure. Our data suggest that the guanylyltransferase subunit of the capping enzyme plays a role in transcription elongation as well as cap formation. First, in addition to the 6AU sensitivity, ceg1-63 is synthetically lethal with elongation-defective mutations in RNA polymerase II. Secondly, it produces a prolonged steady-state level of GAL1 mRNA after glucose shutoff. Third, it decreases the transcription read through a tandem array of promoter-proximal pause sites in an orientation-dependent manner. Taken together, we present direct evidence that suggests a role of capping enzyme in an early transcription. Capping enzyme ensures the early transcription checkpoint by capping of the nascent transcript in time and allowing it to extend further.

Indexed as

Transcription, GeneticAllelesAntimetabolitesCell DivisionGene Expression Regulation, FungalHumansmRNA GuanylyltransferasesMutationNucleotidyltransferasesPromoter Regions, GeneticProtein SubunitsRNA CapsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTemperatureUracilAntimetabolitesazauracilmRNA GuanylyltransferasesNucleotidyltransferasesProtein SubunitsRNA CapsSaccharomyces cerevisiae ProteinsUracil

Identifiers

PMID15226422
PMCPMC434235
OpenAlexW2168591783

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.