Evidence map›Paper›PMID 15226411›Full record

ArticleNucleic acids research2004

Promoter-binding and repression of PDGFRB by c-Myc are separable activities.

Daniel Y L Mao, Dalia Barsyte-Lovejoy, Cynthia S W Ho, John D Watson, Angelina Stojanova, Linda Z Penn

Abstract read
In one paragraph

Article in Nucleic acids research, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Blockade of PDGFRβ circumvents resistance to MEK-JAK inhibition via intratumoral CD8Journal of experimental & clinical cancer research : CR · 2019
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Daniel Y L MaoDepartment of Medical Biophysics, University of Toronto, Toronto, Ontario M5G 2M9, Canada.
Dalia Barsyte-Lovejoy
Cynthia S W Ho
John D Watson
Angelina Stojanova
Linda Z Penn

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The c-Myc transcription factor represses the mRNA expression of the platelet-derived growth factor receptor beta gene (PDGFRB). Using chromatin immunoprecipitation, we show that c-Myc binds to the proximal promoter of the PDGFRB gene in proliferating rat fibroblasts. Interestingly, mutant c-Myc proteins that are unable to repress PDGFRB gene expression, c-Myc(dBR) and c-Myc(d106-143), are still able to bind to the promoter in vivo. Hence, promoter-binding and repression of PDGFRB by c-Myc are separable activities. We also show that Myc repression of PDGFRB is not dependent on previously described or known transactivator-binding regions, suggesting Myc may be recruited to the promoter by multiple or yet unidentified transcription factors. In the presence of intact promoter-binding by Myc, trichostatin A (TSA) can block Myc repression of PDGFRB in vivo, again demonstrating that promoter-binding and repression are separable. Taken together, we hypothesize that Myc repression of PDGFRB expression occurs by a multi-step mechanism in which repression is initiated after Myc is recruited to the promoter.

Indexed as

Promoter Regions, GeneticAnimalsBinding SitesDNA-Binding ProteinsFibroblastsGene Expression RegulationHydroxamic AcidsProto-Oncogene Proteins c-mycRatsReceptor, Platelet-Derived Growth Factor betaRepressor ProteinsRNA Polymerase IITrans-ActivatorsDNA-Binding ProteinsHydroxamic AcidsProto-Oncogene Proteins c-mycReceptor, Platelet-Derived Growth Factor betaRepressor ProteinsRNA Polymerase IITrans-Activatorstrichostatin A

Identifiers

PMID15226411
PMCPMC443544

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.