Evidence map›Paper›PMID 15221452›Full record

ArticleMolecular genetics and genomics : MGG2004

Global transcriptional analysis of the phosphate starvation response in Sinorhizobium meliloti strains 1021 and 2011.

E Krol, A Becker

Abstract read
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In one paragraph

Article in Molecular genetics and genomics : MGG, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed
14.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed, 182 citations in OpenAlex.

  1. Transcriptome analysis ofMicrobiology spectrum · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Transcriptomic response ofFrontiers in microbiology · 2023
    Article
  11. TheFrontiers in microbiology · 2022
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Phosphate limitation increases coenzyme QSynthetic and systems biotechnology · 2019
    Article
  17. Article
  18. MostmSphere · 2018
    Article
  19. Review
  20. Article

32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

E KrolLehrstuhl für Genetik, Fakultät für Biologie, Universität Bielefeld, Postfach 100131, 33501, Bielefeld, Germany.
A Becker
Bielefeld University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The global response to phosphate starvation was analysed at the transcriptional level in two closely related strains of Sinorhizobium meliloti, Rm1021 and Rm2011. The Pho regulon is known to be induced by PhoB under conditions of phosphate limitation. Ninety-eight genes were found to be significantly induced (more than three-fold) in a phoB -dependent manner in phosphate-stressed cells, and phoB -independent repression of 86 genes was observed. Possible roles of these genes in the phosphate stress response are discussed. Twenty new putative PHO box sequences were identified in regions upstream of 17 of the transcriptional units that showed phoB -dependent, or partially phoB -dependent, regulation, indicating direct regulation of these genes by PhoB. Despite the overall similarity between the phosphate stress responses in Rm1021 and Rm2011, lower induction rates were found for a set of phoB -dependent genes in Rm1021. Moreover, Rm1021 exhibited moderate constitutive activation of 12 phosphate starvation-inducible, phoB -dependent genes when cells were grown in a complex medium. A 1-bp deletion was observed in the pstC ORF in Rm1021, which results in truncation of the protein product. This mutation is probably responsible for the expression of phosphate starvation-inducible genes in Rm1021 in the absence of phosphate stress.

Indexed as

Gene ExpressionATP-Binding Cassette TransportersBacterial ProteinsCarbonic AnhydrasesChemotaxisGalactansGene Expression ProfilingGlucansIronMutationOligonucleotide Array Sequence AnalysisOxidative StressPhosphatesPhosphorusPolysaccharides, BacterialReverse Transcriptase Polymerase Chain ReactionATP-Binding Cassette TransportersBacterial ProteinsCarbonic AnhydrasesGalactansgalactoglucanGlucansIronPhoB protein, BacteriaPhosphatesPhosphorusPolysaccharides, BacterialPstC protein, bacteriasuccinoglycan

Identifiers

PMID15221452
OpenAlexW2124781655

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.