Evidence map›Paper›PMID 15220453›Full record

ArticleJournal of virology2004

Rotavirus serotype G9 strains belonging to VP7 gene phylogenetic sequence lineage 1 may be more suitable for serotype G9 vaccine candidates than those belonging to lineage 2 or 3.

Yasutaka Hoshino, Ronald W Jones, Jerri Ross, Shinjiro Honma, Norma Santos, Jon R Gentsch, Albert Z Kapikian

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 60 citations in OpenAlex.

  1. Frontiers in microbiology · 2026
    Review
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Leveraging a ValidatedFrontiers in genetics · 2020
    Article
  8. Article
  9. Article
  10. Comparative genomic analysis of genogroup 1 (Wa-like) rotaviruses circulating in the USA, 2006-2009.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2014
    Article
  11. Article
  12. Article
  13. Group A rotaviruses in children with gastroenteritis in a Canadian pediatric hospital: The prevaccine era.The Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2013
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Acrylamide concentration affects the relative position of VP7 gene of serotype G2 strains as determined by polyacrylamide gel electrophoresis.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2008
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Yasutaka HoshinoLaboratory of Infectious Diseases, National Institutes of Health, Bethesda, MD 20892-8026, USA. THOSHINO@niaid.nih.gov
Ronald W Jones
Jerri Ross
Shinjiro Honma
Norma Santos
Jon R Gentsch
Albert Z Kapikian
National Institutes of Health · USNational Institute of Allergy and Infectious Diseases · USCenters for Disease Control and Prevention · USUniversidade Federal do Rio de Janeiro · BR

Funding

Development And Evaluation Of Live, Attenuated Rotavirus VaccinesZIAAI000341 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI KAPIKIAN, ALBERT Z · 2009 to 2013
$1.9M
Live, Attenuated Rotavirus VaccinesZ01AI000341 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI KAPIKIAN, ALBERT · 1985 to 2008
$1.0M
Rotavirus Pathogenesis And Vaccine DevelopmentZ01AI000340 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI HOSHINO, YASUTAKA · 1985 to 2008
$388k
ISOLATION IN CELL CULTURE AND SEROTYPIC CHARACTERIZATION OF HUMAN ROTAVIRUSESZ01AI000339 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI HOSHINO, YASUTAKA · 1985 to 2008
$364k
Isolation And Serotypic Characterization Of Human And Animal RotavirusesZIAAI000339 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI HOSHINO, YASUTAKA · 2009 to 2010
$342k
Genetic Studies Of Rotavirus Pathogenesis And Development Of Rotavirus VaccinesZIAAI000340 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI HOSHINO, YASUTAKA · 2009 to 2010
$342k
6 · The paper itself

Abstract

A safe and effective group A rotavirus vaccine that could prevent severe diarrhea or ameliorate its symptoms in infants and young children is urgently needed in both developing and developed countries. Rotavirus VP7 serotypes G1, G2, G3, and G4 have been well established to be of epidemiologic importance worldwide. Recently, serotype G9 has emerged as the fifth globally common type of rotavirus of clinical importance. Sequence analysis of the VP7 gene of various G9 isolates has demonstrated the existence of at least three phylogenetic lineages. The goal of our study was to determine the relationship of the phylogenetic lineages to the neutralization specificity of various G9 strains. We generated eight single VP7 gene substitution reassortants, each of which bore a single VP7 gene encoding G9 specificity of one of the eight G9 strains (two lineage 1, one lineage 2 and five lineage 3 strains) and the remaining 10 genes of bovine rotavirus strain UK, and two hyperimmune guinea pig antisera to each reassortant, and we then analyzed VP7 neutralization characteristics of the eight G9 strains as well as an additional G9 strain belonging to lineage 1; the nine strains were isolated in five countries. Antisera to lineage 1 viruses neutralized lineage 2 and 3 strains to at least within eightfold of the homotypic lineage viruses. Antisera to lineage 2 virus neutralized lineage 3 viruses to at least twofold of the homotypic lineage 2 virus; however, neutralization of lineage 1 viruses was fourfold (F45 and AU32) to 16- to 64-fold (WI61) less efficient. Antisera to lineage 3 viruses neutralized the lineage 2 strain 16- to 64-fold less efficiently, the lineage 1 strains F45 and AU32 8- to 128-fold less efficiently, and WI61 (prototype G9 strain) 128- to 1024-fold less efficiently than the homotypic lineage 3 viruses. These findings may have important implications for the development of G9 rotavirus vaccine candidates, as the strain with the broadest reactivity (i.e., a prime strain) would certainly be the ideal strain for inclusion in a vaccine.

Indexed as

Antigens, ViralPhylogenyRotavirus VaccinesAmino Acid SequenceAnimalsAntibodies, ViralCapsid ProteinsCell LineCells, CulturedHumansImmune SeraKidneyMolecular Sequence DataNeutralization TestsReassortant VirusesRotavirusAntibodies, ViralAntigens, ViralCapsid ProteinsImmune SeraRotavirus VaccinesVP7 protein, Rotavirus

Identifiers

PMID15220453
PMCPMC434108
OpenAlexW2060273460

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.