Evidence map›Paper›PMID 15215523›Full record

ArticleProtein science : a publication of the Protein Society2004

Removal of N-terminal methionine from recombinant proteins by engineered E. coli methionine aminopeptidase.

You-Di Liao, Jen-Chong Jeng, Chiu-Feng Wang, Sui-Chi Wang, Shu-Ting Chang

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 79 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Strategies to Enhance Periplasmic Recombinant Protein Production Yields inFrontiers in bioengineering and biotechnology · 2021
    Review
  7. Development of Native MS Capabilities on an Extended Mass Range Q-TOF MS.International journal of mass spectrometry · 2020
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Engineering posttranslational proofreading to discriminate nonstandard amino acids.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  14. Article
  15. Article
  16. Review
  17. N-Terminal Methionine Processing.Current protocols in protein science · 2017
    Article
  18. Article
  19. Overview of the purification of recombinant proteins.Current protocols in protein science · 2015
    Review
  20. Motif-directed redesign of enzyme specificity.Protein science : a publication of the Protein Society · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

You-Di LiaoInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan 115. ydliao@ibms.sinica.edu.tw
Jen-Chong Jeng
Chiu-Feng Wang
Sui-Chi Wang
Shu-Ting Chang
Institute of Biomedical Sciences, Academia Sinica · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The removal of N-terminal translation initiator Met by methionine aminopeptidase (MetAP) is often crucial for the function and stability of proteins. On the basis of crystal structure and sequence alignment of MetAPs, we have engineered Escherichia coli MetAP by the mutation of three residues, Y168G, M206T, Q233G, in the substrate-binding pocket. Our engineered MetAPs are able to remove the Met from bulky or acidic penultimate residues, such as Met, His, Asp, Asn, Glu, Gln, Leu, Ile, Tyr, and Trp, as well as from small residues. The penultimate residue, the second residue after Met, was further removed if the antepenultimate residue, the third residue after Met, was small. By the coexpression of engineered MetAP in E. coli through the same or a separate vector, we have successfully produced recombinant proteins possessing an innate N terminus, such as onconase, an antitumor ribonuclease from the frog Rana pipiens. The N-terminal pyroglutamate of recombinant onconase is critical for its structural integrity, catalytic activity, and cyto-toxicity. On the basis of N-terminal sequence information in the protein database, 85%-90% of recombinant proteins should be produced in authentic form by our engineered MetAPs.

Indexed as

MutationAmino AcidsAmino Acid SubstitutionAminopeptidasesAnimalsBinding SitesEscherichia coliGene ExpressionMethionineMethionyl AminopeptidasesMutagenesis, Site-DirectedProtein EngineeringRana pipiensRecombinant ProteinsRibonucleasesSubstrate SpecificityAmino AcidsAminopeptidasesMethionineMethionyl AminopeptidasesranpirnaseRecombinant ProteinsRibonucleases

Identifiers

PMID15215523
PMCPMC2279930
OpenAlexW2097893893

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.