Evidence map›Paper›PMID 15215401›Full record

ArticleNucleic acids research2004

GOblet: a platform for Gene Ontology annotation of anonymous sequence data.

Detlef Groth, Hans Lehrach, Steffen Hennig

Abstract read
In one paragraph

Article in Nucleic acids research, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Review
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  7. Review
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  14. A threading-based method (FINDSITE) for ligand-binding site prediction and functional annotation.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  15. Article
  16. Article
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  18. Proteomic analysis of Schistosoma mansoni egg secretions.Molecular and biochemical parasitology · 2007
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Detlef GrothMax Planck Institute for Molecular Genetics, Ihnestrasse 73, 14195 Berlin, Germany.
Hans Lehrach
Steffen Hennig

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

GOblet is a comprehensive web server application providing the annotation of anonymous sequence data with Gene Ontology (GO) terms. It uses a variety of different protein databases (human, murines, invertebrates, plants, sp-trembl) and their respective GO mappings. The user selects the appropriate database and alignment threshold and thereafter submits single or multiple nucleotide or protein sequences. Results are shown in different ways, e.g. as survey statistics for the main GO categories for all sequences or as detailed results for each single sequence that has been submitted. In its newest version, GOblet allows the batch submission of sequences and provides an improved display of results with the aid of Java applets. All output data, together with the Java applet, are packed to a downloadable archive for local installation and analysis. GOblet can be accessed freely at http://goblet.molgen.mpg.de.

Indexed as

GenesSequence Analysis, DNASequence Analysis, ProteinSoftwareAnimalsDatabases, ProteinDNA, ComplementaryHumansInternetInvertebratesMicePlantsSequence HomologyUser-Computer InterfaceDNA, Complementary

Identifiers

PMID15215401
PMCPMC441544

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.