Evidence map›Paper›PMID 15213169›Full record

ArticleInfection and immunity2004

Transcriptional responses of intestinal epithelial cells to infection with Vibrio cholerae.

Neil R Stokes, Xin Zhou, Stephen J Meltzer, James B Kaper

Open access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Neil R StokesCenter for Vaccine Development, University of Maryland School of Medicine, 685 West Baltimore Street, Baltimore, MD 21201, USA.
Xin Zhou
Stephen J Meltzer
James B Kaper
University of Maryland, Baltimore · US

Funding

Comprehensive Biomarker Development in early EsophagogasU01CA085069 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI MELTZER, STEPHEN J · 1999 to 2009
$4.8M
DEVELOPMENT OF A LIVE ORAL CHOLERA VACCINER01AI019716 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI KAPER, JAMES B · 1989 to 2010
$4.4M
The Human Colorectal InstabilitomeR01CA077057 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI MELTZER, STEPHEN J · 1998 to 2007
$2.6M
Genomics: Esophageal Metaplasia-Associated MalignancyR01CA001808 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI MELTZER, STEPHEN J · 2002 to 2006
$1.9M
Neoplastic Complications in Inflammatory Bowel DiseaseR01CA095323 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI MELTZER, STEPHEN J · 2003 to 2007
$1.4M
Novel Methylation Targets in Gastric CancerR21CA098450 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI MELTZER, STEPHEN J · 2003 to 2005
$446k
DEVELOPMENT OF A LIVE ORAL CHOLERA VACCINER22AI019716 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI KAPER, JAMES B · 1985 to 1991
–
NCI NIH HHS CA 01808NCI NIH HHS CA 77057NCI NIH HHS CA 85069NCI NIH HHS CA 95323NCI NIH HHS CA 98450NCI NIH HHS R01 CA001808NCI NIH HHS R01 CA077057NCI NIH HHS R01 CA095323NCI NIH HHS R21 CA098450NCI NIH HHS U01 CA085069NIAID NIH HHS AI 19716NIAID NIH HHS R01 AI019716
6 · The paper itself

Abstract

Vibrio cholerae is a noninvasive enteric bacterium that causes the severe diarrheal disease cholera. Candidate cholera vaccines have been engineered by deleting genes encoding known virulence factors in V. cholerae; however, many of these attenuated strains were still reactogenic in human volunteers. In this study, DNA arrays were utilized to monitor the transcriptional responses of human intestinal epithelial cells (T84) to eight strains of V. cholerae, including attenuated, toxigenic, and environmental isolates. cDNA probes generated from host RNA samples were hybridized against low- and high-density gene arrays. V. cholerae induced the transcription of a variety of host genes and repressed the expression of a lower number of genes. Expression patterns were confirmed for certain genes by reverse transcriptase PCR and enzyme-linked immunosorbent assays. A core subset of genes was found to be differentially regulated in all experiments. These genes included genes involved in innate mucosal immunity, intracellular signaling, and cellular proliferation. Reactogenic vaccine strains induced greater expression of genes for certain proinflammatory cytokines than nonreactogenic strains. Wild-type and attenuated derivatives induced and repressed many genes in common, although there were differences in the transcription profiles. These results indicate that the types of host genes modulated by attenuated V. cholerae, and the extent of their induction, may mediate the symptoms seen with reactogenic cholera vaccine strains.

Indexed as

ChemokinesCholeraCholera VaccinesEpithelial CellsGene ExpressionGene Expression ProfilingHost-Parasite InteractionsIntestinal MucosaIntestinesMutationTranscription, GeneticVibrio choleraeChemokinesCholera Vaccines

Identifiers

PMID15213169
PMCPMC427408
OpenAlexW2140852313

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.