ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2004
Tall fescue EST-SSR markers with transferability across several grass species.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers, 1 of them a synthesis that pooled it.
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Who cites it
89 citing papers in PubMed, 1 synthesis or guideline pooled it, 326 citations in OpenAlex.
- Traditional System Versus DNA Barcoding in Identification of Bamboo Species: A Systematic Review.Molecular biotechnology · 2021Pooled it
- Genetic Covariation Between the Vertically Transmitted Endophyte Epichloë canadensis and Its Host Canada Wildrye.Microbial ecology · 2023Article
- Development and Validation of Gene-Based SSR Markers in the GenusScientifica · 2023Article
- Analysis of Genetic Diversity of Fescue Populations from the Highlands of Bolivia Using EST-SSR Markers.Genes · 2022Article
- Unravelling genetic architecture and development of core set from elite rice lines using yield-related candidate gene markers.Physiology and molecular biology of plants : an international journal of functional plant biology · 2022Article
- Metabolomic Fingerprinting and Molecular Characterization of the Rock Samphire Germplasm Collection from the Balkan Botanic Garden of Kroussia, Northern Greece.Plants (Basel, Switzerland) · 2022Article
- Dynamic Responses of Antioxidant and Glyoxalase Systems to Seed Aging Based on Full-Length Transcriptome in Oat (Antioxidants (Basel, Switzerland) · 2022Article
- De novo transcriptome assembly and EST-SSR markers development for Zelkova schneideriana Hand.-Mazz. (Ulmaceae).3 Biotech · 2021Article
- Development and characterization of genic SSR-FDM for stem gall disease resistance in coriander (Coriandrum sativum L.) and its cross species transferability.Molecular biology reports · 2021Article
- Development of Novel Polymorphic EST-SSR Markers from the Cranberry Fruit Transcriptome.Iranian journal of biotechnology · 2021Article
- Insight into morphological and molecular variations across Iranian spinach landraces.Molecular biology reports · 2021Article
- Novel Expressed Sequence Tag-Derived and Other Genomic Simple Sequence Repeat Markers Revealed Genetic Diversity in Ethiopian Finger Millet Landrace Populations and Cultivars.Frontiers in plant science · 2021Article
- Development of EST-SSR Markers Linked to Flowering Candidate Genes inPlants (Basel, Switzerland) · 2020Article
- Evaluation of Cross-Species Transferability of SSR Markers inPlants (Basel, Switzerland) · 2020Article
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- Comparative analysis of microsatellite, SNP, and InDel markers in fourBreeding science · 2018Article
- Characterization of leaf transcriptome, development and utilization of unigenes-derived microsatellite markers in sugarcane (Physiology and molecular biology of plants : an international journal of functional plant biology · 2018Article
- Simple Sequence Repeat (SSR) Genetic Linkage Map of D Genome Diploid Cotton Derived from an Interspecific Cross between Gossypium davidsonii and Gossypium klotzschianum.International journal of molecular sciences · 2018Article
- Molecular regulation and physiological functions of a novel FaHsfA2c cloned from tall fescue conferring plant tolerance to heat stress.Plant biotechnology journal · 2017Article
29 more citing papers are in PubMed but not listed here.
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Authors and funding
6 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Tall fescue (Festuca arundinacea Schreb.) is a major cool season forage and turf grass in the temperate regions of the world. It is also a close relative of other important forage and turf grasses, including meadow fescue and the cultivated ryegrass species. Until now, no SSR markers have been developed from the tall fescue genome. We designed 157 EST-SSR primer pairs from tall fescue ESTs and tested them on 11 genotypes representing seven grass species. Nearly 92% of the primer pairs produced characteristic simple sequence repeat (SSR) bands in at least one species. A large proportion of the primer pairs produced clear reproducible bands in other grass species, with most success in the close taxonomic relatives of tall fescue. A high level of marker polymorphism was observed in the outcrossing species tall fescue and ryegrass (66%). The marker polymorphism in the self-pollinated species rice and wheat was low (43% and 38%, respectively). These SSR markers were useful in the evaluation of genetic relationships among the Festuca and Lolium species. Sequencing of selected PCR bands revealed that the nucleotide sequences of the forage grass genotypes were highly conserved. The two cereal species, particularly rice, had significantly different nucleotide sequences compared to the forage grasses. Our results indicate that the tall fescue EST-SSR markers are valuable genetic markers for the Festuca and Lolium genera. These are also potentially useful markers for comparative genomics among several grass species.
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