Evidence map›Paper›PMID 15199154›Full record

ArticleMolecular and cellular biology2004

Phosphorylation by protein kinase CK2 changes the DNA binding properties of the human chromatin protein DEK.

Ferdinand Kappes, Catalina Damoc, Rolf Knippers, Michael Przybylski, Lorenzo A Pinna, Claudia Gruss

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 113 citations in OpenAlex.

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  9. Review
  10. A DEK domain-containing protein GhDEK2D mediatedPlant signaling & behavior · 2022
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  14. Review
  15. Transcriptional profiling reveals signatures of latent developmental potential inProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  16. Article
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  18. Article
  19. Article
  20. Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Ferdinand KappesDepartment of Biology, University of Konstanz, Germany. Ferdinand.Kappes@gmx.de
Catalina Damoc
Rolf Knippers
Michael Przybylski
Lorenzo A Pinna
Claudia Gruss
University of Konstanz · DEUniversity of Padua · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have examined the posttranslational modification of the human chromatin protein DEK and found that DEK is phosphorylated by the protein kinase CK2 in vitro and in vivo. Phosphorylation sites were mapped by quadrupole ion trap mass spectrometry and found to be clustered in the C-terminal region of the DEK protein. Phosphorylation fluctuates during the cell cycle with a moderate peak during G(1) phase. Filter binding assays, as well as Southwestern analysis, demonstrate that phosphorylation weakens the binding of DEK to DNA. In vivo, however, phosphorylated DEK remains on chromatin. We present evidence that phosphorylated DEK is tethered to chromatin throughout the cell cycle by the un- or underphosphorylated form of DEK.

Indexed as

Amino Acid SequenceBinding SitesCasein Kinase IICell CycleChromatinChromosomal Proteins, Non-HistoneDNADNA-Binding ProteinsHeLa CellsHumansMass SpectrometryOncogene ProteinsPhosphorylationPoly-ADP-Ribose Binding ProteinsProtein Processing, Post-TranslationalProtein Serine-Threonine KinasesCasein Kinase IIChromatinChromosomal Proteins, Non-HistoneDEK protein, humanDNADNA-Binding ProteinsOncogene ProteinsPoly-ADP-Ribose Binding ProteinsProtein Serine-Threonine Kinases

Identifiers

PMID15199154
PMCPMC480878
OpenAlexW2171531788

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.