Evidence map›Paper›PMID 15198983›Full record

ArticleGenes & development2004

A new yeast PUF family protein, Puf6p, represses ASH1 mRNA translation and is required for its localization.

Wei Gu, Yingfeng Deng, Daniel Zenklusen, Robert H Singer

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 110 papers.

0numbers the graph read from it
0cells of the map it votes in
110citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

110 citing papers in PubMed, 189 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. International journal of molecular sciences · 2023
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Intracellular mRNA transport and localized translation.Nature reviews. Molecular cell biology · 2021
    Review
  12. Functions of PUF Family RNA-Binding Proteins inJournal of microbiology and biotechnology · 2021
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Regulation of Translation in the Protozoan ParasiteInternational journal of molecular sciences · 2020
    Review
  18. Review
  19. Article
  20. Article

50 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Wei GuDepartment of Anatomy and Structural Biology, Albert Einstein College of Medicine, Bronx, New York 10461, USA.
Yingfeng Deng
Daniel Zenklusen
Robert H Singer
Albert Einstein College of Medicine · USYeshiva University · US

Funding

RNA TRANSPORT AND LOCALIZATION IN YEAST IN SITUR01GM057071 · NIGMS · YESHIVA UNIVERSITY · PI SINGER, ROBERT H · 1998 to 2019
$5.7M
NIGMS NIH HHS GM 57071NIGMS NIH HHS R01 GM057071
6 · The paper itself

Abstract

In yeast Saccharomyces cerevisiae, Ash1p, a protein determinant for mating-type switching, is segregated within the daughter cell nucleus to establish asymmetry of HO expression. The accumulation of Ash1p results from ASH1 mRNA that is sorted as a ribonucleoprotein particle (mRNP or locasome) to the distal tip of the bud where translation occurs. To study the mechanism regulating ASH1 mRNA translation, we isolated the ASH1 locasome and characterized the associated proteins by MALDI-TOF. One of these proteins was Puf6p, a new member of the PUF family of highly conserved RNA-binding proteins such as Pumilio in Drosophila, responsible for translational repression, usually to effect asymmetric expression. Puf6p-bound PUF consensus sequences in the 3'UTR of ASH1 mRNA and repressed the translation of ASH1 mRNA both in vivo and in vitro. In the puf6 Delta strain, asymmetric localization of both Ash1p and ASH1 mRNA were significantly reduced. We propose that Puf6p is a protein that functions in the translational control of ASH1 mRNA, and this translational inhibition is necessary before localization can proceed.

Indexed as

Drosophila ProteinsProtein Biosynthesis3' Untranslated RegionsDNA-Binding ProteinsGene Expression RegulationRepressor ProteinsRibonucleoproteinsRNA-Binding ProteinsRNA, MessengerSaccharomyces cerevisiae ProteinsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationTranscription Factors3' Untranslated RegionsASH1 protein, DrosophilaASH1 protein, S cerevisiaeDNA-Binding ProteinsDrosophila Proteinsmessenger ribonucleoproteinPuf6 protein, S cerevisiaeRepressor ProteinsRibonucleoproteinsRNA-Binding ProteinsRNA, MessengerSaccharomyces cerevisiae ProteinsTranscription Factors

Identifiers

PMID15198983
PMCPMC423195
OpenAlexW2138630554

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.