ArticleJournal of virology2004
Sequence analysis of the genome of the Neodiprion sertifer nucleopolyhedrovirus.
Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.
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Who cites it
36 citing papers in PubMed, 112 citations in OpenAlex.
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- Protein-Gene Orthology inViruses · 2023Article
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- The genome of the nucleopolyhedrosis-causing virus from Tipula oleracea sheds new light on the Nudiviridae family.Journal of virology · 2015Article
- Modularity and evolutionary constraints in a baculovirus gene regulatory network.BMC systems biology · 2013Article
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- The ac53, ac78, ac101, and ac103 genes are newly discovered core genes in the family Baculoviridae.Journal of virology · 2012Article
- Analysis of the genome of the sexually transmitted insect virus Helicoverpa zea nudivirus 2.Viruses · 2012Article
- Complete sequence, analysis and organization of the Orgyia leucostigma nucleopolyhedrovirus genome.Viruses · 2011Article
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- Baculovirus: molecular insights on their diversity and conservation.International journal of evolutionary biology · 2011Article
- Genomic sequencing and analyses of Lymantria xylina multiple nucleopolyhedrovirus.BMC genomics · 2010Article
- Autographa californica multiple nucleopolyhedrovirus core gene ac96 encodes a per Os infectivity factor (PIF-4).Journal of virology · 2009Article
- Structural and phylogenetic relationship of ORF 31 from the Anticarsia gemmatalis MNPV to poly (ADP-ribose) polymerases (PARP).Virus genes · 2008Article
- Promoter analysis of Bombyx mori nucleopolyhedrovirus ubiquitin gene.Journal of microbiology (Seoul, Korea) · 2008Article
- Characterization of AcMNPV with a deletion of ac68 gene.Virus genes · 2008Article
Corrections and comments
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Authors and funding
7 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The genome of the Neodiprion sertifer nucleopolyhedrovirus (NeseNPV), which infects the European pine sawfly, N. sertifer (Hymenoptera: Diprionidae), was sequenced and analyzed. The genome was 86,462 bp in size. The C+G content of 34% was lower than that of the majority of baculoviruses. A total of 90 methionine-initiated open reading frames (ORFs) with more than 50 amino acids and minimal overlapping were found. From those, 43 ORFs were homologous to other baculovirus ORFs, and 29 of these were from the 30 conserved core genes among all baculoviruses. A NeseNPV homolog to the ld130 gene, which is present in all other baculovirus genomes sequenced to date, could not be identified. Six NeseNPV ORFs were similar to non-baculovirus-related genes, one of which was a trypsin-like gene. Only one iap gene, containing a single BIR motif and a RING finger, was found in NeseNPV. Two NeseNPV ORFs (nese18 and nese19) were duplicates transcribed in opposite orientations from each other. NeseNPV did not have an AcMNPV ORF 2 homolog characterized as the baculovirus repeat ORF (bro). Six homologous regions (hrs) were located within the NeseNPV genome, each containing small palindromes embedded within direct repeats. A phylogenetic analysis was done to root the tree based upon the sequences of DNA polymerase genes of NeseNPV, 23 other baculoviruses, and other phyla. Baculovirus phylogeny was then constructed with 29 conserved genes from 24 baculovirus genomes. Culex nigripalpus nucleopolyhedrovirus (CuniNPV) was the most distantly related baculovirus, branching to the hymenopteran NeseNPV and the lepidopteran nucleopolyhedroviruses and granuloviruses.
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