Evidence map›Paper›PMID 15185170›Full record

SynthesisAmerican journal of human genetics2004

Meta-analysis of 13 genome scans reveals multiple cleft lip/palate genes with novel loci on 9q21 and 2q32-35.

Mary L Marazita, Jeffrey C Murray, Andrew C Lidral, Mauricio Arcos-Burgos, Margaret E Cooper, Toby Goldstein, Brion S Maher, Sandra Daack-Hirsch, Rebecca Schultz, M Adela Mansilla and 20 more

Open access · bronzeAbstract readMeta-Analysis
In one paragraph

Synthesis in American journal of human genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed, 4 pooled it
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 4 syntheses or guidelines pooled it, 222 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Meta-analysis in psychiatric genetics.Current psychiatry reports · 2005
    Pooled it
  5. Article
  6. Article
  7. Association analysis between forkhead box E1 gene and non-syndromic cleft lip with or without cleft palate in Han Chinese population.Hua xi kou qiang yi xue za zhi = Huaxi kouqiang yixue zazhi = West China journal of stomatology · 2025
    Article
  8. Article
  9. Article
  10. Association of soluble epoxide hydrolase 2 gene with the risk of non-syndromic cleft lip with or without cleft palate in western Han Chinese population.Hua xi kou qiang yi xue za zhi = Huaxi kouqiang yixue zazhi = West China journal of stomatology · 2022
    Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. The Morphology of Cross-Beaks andAnimals : an open access journal from MDPI · 2019
    Article
  17. Biomaterials for Cleft Lip and Palate Regeneration.International journal of molecular sciences · 2019
    Review
  18. Zebrafish models of orofacial clefts.Developmental dynamics : an official publication of the American Association of Anatomists · 2017
    Review
  19. Article
  20. Article

37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 16 institutions in 8 countries.

Mary L MarazitaCenter for Craniofacial and Dental Genetics, Division of Oral Biology, School of Dental Medicine, University of Pittsburgh, Pittsburgh, PA 15219, USA. marazita@sdmgenetics.pitt.edu
Jeffrey C Murray
Andrew C Lidral
Mauricio Arcos-Burgos
Margaret E Cooper
Toby Goldstein
Brion S Maher
Sandra Daack-Hirsch
Rebecca Schultz
M Adela Mansilla
L Leigh Field
You-e Liu
Natalie Prescott
Sue Malcolm
Robin Winter
Ajit Ray
Lina Moreno
Consuelo Valencia
Katherine Neiswanger
Diego F Wyszynski
Joan E Bailey-Wilson
Hasan Albacha-Hejazi
Terri H Beaty
Iain McIntosh
Jacqueline B Hetmanski
Gökhan Tunçbilek
Matthew Edwards
Louise Harkin
Rodney Scott
Laurence G Roddick
University of Iowa · USUniversity of Pittsburgh · USInstitute of Child Health · INUniversidad de Antioquia · COBoston University · USHacettepe University · TRHospital Damas · PRHunter Genetics · AUHunter Medical Research Institute · AUJohn Hunter Children's Hospital · AUJohns Hopkins University · USNational Human Genome Research Institute · USShangHai JiAi Genetics & IVF Institute · CNThe University of Adelaide · AUUniversity of British Columbia · CAUniversity of Toronto · CA

Funding

Extending the Phenotype of Nonsyndromic Orofacial CleftsR01DE016148 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MARAZITA, MARY L., WEINBERG, SETH M · 2004 to 2018
$19.7M
SEARCHING FOR SUSCEPTIBILITY GENES FOR ORAL CLEFTSP60DE013078 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI JABS, ETHYLIN WANG · 1999 to 2003
$8.9M
THERMAL ASSEMBLY OF MINERAL/COLLAGEN BIOMATERIALSP60DE013076 · NIDCR · UNIVERSITY OF IOWA · PI MURRAY, JEFFREY C · 1999 to 2003
$8.4M
WATER PRECAUTIONS AND TYMPANOSTOMY TUBESM01RR000084 · NCRR · CHILDREN'S HOSP PITTSBURGH/UPMC HLTH SYS · PI PERLMUTTER, DAVID H · 1985 to 2006
$5.6M
Cleft Lip Genetics: A Multi Center International ConsortiumR01DE014667 · NIDCR · UNIVERSITY OF IOWA · PI LIDRAL, ANDREW C · 2001 to 2009
$4.2M
MOLECULAR GENETIC EPIDEMIOLOGY OF CLEFT LIP AND PALATER01DE008559 · NIDCR · UNIVERSITY OF IOWA · PI MURRAY, JEFFREY C · 1988 to 2003
$1.5M
GENETIC MAPPING STUDIES OF ORAL-FACIAL CLEFTS IN CHINAR01DE009886 · NIDCR · VIRGINIA COMMONWEALTH UNIVERSITY · PI MARAZITA, MARY L · 1992 to 2002
$1.0M
Cleft Lip Genetics: Multicenter International ConsortiumK02DE015291 · NIDCR · UNIVERSITY OF IOWA · PI LIDRAL, ANDREW C · 2003 to 2007
$514k
HOMOZYGOSITY MAPPING OF ORAL-FACIAL CLEFTS IN TURKEYR01DE012472 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MARAZITA, MARY L · 1998 to 2000
$241k
GENETIC ANALYSIS OF HEREDITARY SYNDROMIC ORAL CLEFTSZ01HG000109 · NHGRI · HUMAN GENOME RESEARCH · PI BAILEY-WILSON, JOAN E. · 1997 to 2004
–
NCRR NIH HHS M01 RR000084NCRR NIH HHS RR-00084NIDCR NIH HHS K02 DE015291NIDCR NIH HHS P60 DE013076NIDCR NIH HHS P60 DE013078NIDCR NIH HHS P60-DE-13076NIDCR NIH HHS P60-DE13076NIDCR NIH HHS P60-DE-13078NIDCR NIH HHS R01 DE008559NIDCR NIH HHS R01 DE009886NIDCR NIH HHS R01 DE014667NIDCR NIH HHS R01 DE016148NIDCR NIH HHS R01-DE-08559NIDCR NIH HHS R01-DE-09886NIDCR NIH HHS R01-DE-12472NIDCR NIH HHS R01-DE-14667
6 · The paper itself

Abstract

Isolated or nonsyndromic cleft lip with or without cleft palate (CL/P) is a common birth defect with a complex etiology. A 10-cM genome scan of 388 extended multiplex families with CL/P from seven diverse populations (2,551 genotyped individuals) revealed CL/P genes in six chromosomal regions, including a novel region at 9q21 (heterogeneity LOD score [HLOD]=6.6). In addition, meta-analyses with the addition of results from 186 more families (six populations; 1,033 genotyped individuals) showed genomewide significance for 10 more regions, including another novel region at 2q32-35 (P=.0004). These are the first genomewide significant linkage results ever reported for CL/P, and they represent an unprecedented demonstration of the power of linkage analysis to detect multiple genes simultaneously for a complex disorder.

Indexed as

Chromosomes, Human, Pair 2Chromosomes, Human, Pair 9Cleft LipCleft PalateGenetic LinkageGenetic MarkersGenetic Predisposition to DiseaseHumansLod ScoreGenetic Markers

Identifiers

PMID15185170
PMCPMC1216052
OpenAlexW2075508829

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.