Evidence map›Paper›PMID 15184419›Full record

ArticleJournal of clinical microbiology2004

Hepatitis B virus genotypes and precore and core mutants in Brazilian patients.

Roberta Sitnik, João Renato Rebello Pinho, Dennis Armando Bertolini, Antonio Plinio Bernardini, Luiz Caetano Da Silva, Flair José Carrilho

Open access · greenAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 137 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Hepatitis A, B and C prevalence among transgender women and travestis in five Brazilian capitals between 2019-2021.Revista brasileira de epidemiologia = Brazilian journal of epidemiology · 2024
    Article
  5. Article
  6. Hepatitis B Prevalence among Men Who Have Sex with Men in Brazil.Tropical medicine and infectious disease · 2023
    Article
  7. Article
  8. Article
  9. Frequency of Hepatitis B Markers in Systemic Lupus Erythematosus Patients in Iran.Asian Pacific journal of cancer prevention : APJCP · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Frequency of OBI among Patients with Autoimmune Hepatitis.Asian Pacific journal of cancer prevention : APJCP · 2020
    Article
  15. Massive Iatrogenic Outbreak of Human Immunodeficiency Virus Type 1 in Rural Cambodia, 2014-2015.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2018
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Roberta SitnikServiço de Virologia, Instituto Adolfo Lutz, Av. Brigadeiro Luiz Antonio, 4701, 01401-002 São Paulo, SP, Brazil.
João Renato Rebello Pinho
Dennis Armando Bertolini
Antonio Plinio Bernardini
Luiz Caetano Da Silva
Flair José Carrilho
Hospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo · BRInstituto Adolfo Lutz · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A method for genotyping hepatitis B virus by partial HBsAg gene sequencing with primers common to all known genotypes was developed. Mutations related to anti-HBs resistance are also detected with this method. Samples from 103 Brazilian patients were analyzed. Precore and core region of these viruses were also sequenced in 101 patients. Genotypes A, B, C, D, and F were found with frequencies of 49.5, 2.9, 13.6, 24.3, and 9.7%, respectively. Genotypes B and C were found only in Asian patients, whereas genotypes A, D, and F were more common in patients without an Asian background. Precore mutants were found in 32 (31.7%) of 101 patients, with a higher frequency in those infected with genotype D (22 of 25 [88.0%]). Analysis of nucleotide 1858 showed presence of thymine in all patients with genotypes B, C, and D and in a few patients with genotypes A (10.0%) and F (30.0%), who showed more frequently the presence of cytosine. This nucleotide was closely related to the presence of precore mutants. Mutations in the basal core promoter were found in 64 of 101 (63.4%) samples. These mutations were more frequent in patients infected with genotype F (90.0%) and less frequent in patients infected with genotype B (33.3%). Deletions in this region were found in two genotype C-infected patients.

Indexed as

MutationAmino Acid SequenceFemaleHepatitis B, ChronicHepatitis B Surface AntigensHepatitis B virusHumansMaleMolecular Sequence DataPolymerase Chain ReactionPromoter Regions, GeneticSequence Analysis, DNAHepatitis B Surface Antigens

Identifiers

PMID15184419
PMCPMC427827
OpenAlexW2020441507

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.