Evidence map›Paper›PMID 15181172›Full record

ArticleNucleic acids research2004

The Drosophila Bruno paralogue Bru-3 specifically binds the EDEN translational repression element.

Jérôme Delaunay, Gwenn Le Mée, Nader Ezzeddine, Gilles Labesse, Christophe Terzian, Michèle Capri, Ounissa Aït-Ahmed

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 36 citations in OpenAlex.

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  16. CELFish ways to modulate mRNA decay.Biochimica et biophysica acta
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jérôme DelaunayInstitut de Génétique Humaine, UPR 1142 CNRS, 141 Rue de la Cardonille, 34396 Montpellier Cedex 5, France.
Gwenn Le Mée
Nader Ezzeddine
Gilles Labesse
Christophe Terzian
Michèle Capri
Ounissa Aït-Ahmed
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We reported in our previous work that the EDEN-dependent translational repression of maternal mRNAs was conserved between Drosophila and Xenopus. In Xenopus, this repression is achieved through the binding of EDEN to the Bruno-like factor, EDEN-BP. We show in the present work that the Drosophila Bruno paralogue, the 45 kDa Bru-3 protein (p45), binds specifically to the EDEN element and acts as a homodimer. We describe for the first time a previously undetected 67 amino acid domain, found in the divergent linker region, the lsm domain (lsm stands for linker-specific motif). We propose that the presence of this domain in a subset of the Bruno-like proteins, including Bru-3, EDEN-BP and CUG-BP but not Bruno nor its other paralogue Bru-2, might be responsible for specific RNA recognition. Interestingly, comparative structural analyses using threaders and molecular modelling suggest that the new domain might be distantly related to the first RNA recognition motif of the Drosophila sex-lethal protein (sxl). The phylogenetic analyses and the experimental data based on its specific binding to the EDEN element support the conclusion that Bru-3 is an EDEN-BP/CUG-BP orthologue.

Indexed as

Protein BiosynthesisAmino Acid SequenceAnimalsBinding SitesCloning, MolecularComputational BiologyConserved SequenceDimerizationDrosophila melanogasterDrosophila ProteinsGenes, InsectMolecular Sequence DataMolecular WeightPhylogenyProtein BindingRepressor Proteinsbru3 protein, DrosophilaDrosophila ProteinsEDEN-specific RNA-binding protein, XenopusRepressor ProteinsRNARNA-Binding ProteinsXenopus Proteins

Identifiers

PMID15181172
PMCPMC434433
OpenAlexW2081314598

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.