Evidence map›Paper›PMID 15169897›Full record

ArticleMolecular and cellular biology2004

Activation of a DNA damage checkpoint response in a TAF1-defective cell line.

Ann M Buchmann, Jeffrey R Skaar, James A DeCaprio

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. The roles of TAF1 in neuroscience and beyond.Royal Society open science · 2024
    Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Emerging common molecular pathways for primary dystonia.Movement disorders : official journal of the Movement Disorder Society · 2013
    Review
  11. Bromodomains as therapeutic targets.Expert reviews in molecular medicine · 2011
    Review
  12. Article
  13. Article
  14. ATR: an essential regulator of genome integrity.Nature reviews. Molecular cell biology · 2008
    Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Ann M BuchmannDana-Farber Cancer Institute and Harvard Medical School, Boston, MA 02115, USA.
Jeffrey R Skaar
James A DeCaprio
Dana-Farber Cancer Institute · USHarvard University · US

Funding

VIRAL ONCOPROTEIN PERTURBATION OF RB/E2F PATHWAYP01CA050661 · NCI · DANA-FARBER CANCER INSTITUTE · PI HAHN, WILLIAM C. · 1989 to 2013
$35.8M
Tumor Cell Biology Training ProgramT32CA009361 · NCI · DANA-FARBER CANCER INSTITUTE · PI GRAY, NATHANAEL SCHIANDER · 1985 to 2015
$8.9M
RB-RELATED PROTEINS IN SV4OT AND E1A TRANSFORMATIONR01CA063113 · NCI · DANA-FARBER CANCER INSTITUTE · PI DECAPRIO, JAMES A. · 1994 to 2018
$5.0M
SV40 T TRANSACTIVATION AND TRANSFORMATIONF32CA081745 · NCI · DANA-FARBER CANCER INSTITUTE · PI BUCHMANN, ANN M · 1999 to 2000
$38k
NCI NIH HHS 2T32CA09361NCI NIH HHS F32 CA081745NCI NIH HHS F32CA81745NCI NIH HHS P01 CA050661NCI NIH HHS P01-CA50661NCI NIH HHS R01 CA063113NCI NIH HHS R01-CA63113NCI NIH HHS T32 CA009361
6 · The paper itself

Abstract

Although the link between transcription and DNA repair is well established, defects in the core transcriptional complex itself have not been shown to elicit a DNA damage response. Here we show that a cell line with a temperature-sensitive defect in TBP-associated factor 1 (TAF1), a component of the TFIID general transcription complex, exhibits hallmarks of an ATR-mediated DNA damage response. Upon inactivation of TAF1, ATR rapidly localized to subnuclear foci and contributed to the phosphorylation of several downstream targets, including p53 and Chk1, resulting in cell cycle arrest. The increase in p53 expression and the G(1) phase arrest could be blocked by caffeine, an inhibitor of ATR. In addition, dominant negative forms of ATR but not ATM were able to override the arrest in G(1). These results suggest that a defect in TAF1 can elicit a DNA damage response.

Indexed as

DNA DamageAnimalsCell CycleCell Cycle ProteinsCell LineCricetinaeEnzyme ActivationGene ExpressionGenes, p53Histone AcetyltransferasesMutationPhosphorylationProtein Serine-Threonine KinasesSerineTATA-Binding Protein Associated FactorsTemperatureCell Cycle ProteinsHistone AcetyltransferasesProtein Serine-Threonine KinasesSerineTATA-binding protein associated factor 250 kDaTATA-Binding Protein Associated FactorsTranscription Factor TFIIDTumor Suppressor Protein p53

Identifiers

PMID15169897
PMCPMC419897
OpenAlexW2114720084

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.