ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2004
Large-scale heterospecific segregation distortion in Populus revealed by a dense genetic map.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
47 citing papers in PubMed, 144 citations in OpenAlex.
- High-resolution mapping reveals hotspots and sex-biased recombination in Populus trichocarpa.G3 (Bethesda, Md.) · 2023Article
- Genome Identification and Expression Profiles in Response to Nitrogen Treatment Analysis of the Class I CCoAOMT Gene Family in Populus.Biochemical genetics · 2022Article
- The power and promise of genetic mapping from Plasmodium falciparum crosses utilizing human liver-chimeric mice.Communications biology · 2021Article
- Host plant genetic control of associated fungal and insect species in aEcology and evolution · 2020Article
- Marginal Lands to Grow Novel Bio-Based Crops: A Plant Breeding Perspective.Frontiers in plant science · 2020Review
- Identification of recombination events in outbred species with next-generation sequencing data.BMC genomics · 2018Article
- Construction of a High-Density American Cranberry (G3 (Bethesda, Md.) · 2017Article
- The First Genetic Map in Sweet Osmanthus (Frontiers in plant science · 2017Article
- High-density linkage mapping and distribution of segregation distortion regions in the oak genome.DNA research : an international journal for rapid publication of reports on genes and genomes · 2016Article
- Confirmation of Single-Locus Sex Determination and Female Heterogamety in Willow Based on Linkage Analysis.PloS one · 2016Article
- Article
- Construction of High-Density Linkage Maps of Populus deltoides × P. simonii Using Restriction-Site Associated DNA Sequencing.PloS one · 2016Article
- High density linkage mapping of genomic and transcriptomic SNPs for synteny analysis and anchoring the genome sequence of chickpea.Scientific reports · 2015Article
- Different autosomes evolved into sex chromosomes in the sister genera of Salix and Populus.Scientific reports · 2015Article
- Article
- Crossability of Triticum urartu and Triticum monococcum wheats, homoeologous recombination, and description of a panel of interspecific introgression lines.G3 (Bethesda, Md.) · 2014Article
- The first genetic linkage map of Eucommia ulmoides.Journal of genetics · 2014Article
- Construction of a SSR-based genetic map and identification of QTLs for catechins content in tea plant (Camellia sinensis).PloS one · 2014Article
- Article
- Genetic introgression and species boundary of two geographically overlapping pine species revealed by molecular markers.PloS one · 2014Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
We report the most complete genetic map to have been constructed for the genus Populus. This map includes 544 markers mapped onto 19 linkage groups, equivalent to the Populus chromosome number, with all markers displaying internally consistent linkage patterns. We estimate the genome length to be between 2,300 and 2,500 cM, based both on the observed number of crossovers in the maternal haplotypes, as well as the total observed map length. Genome coverage was estimated to be greater than 99.9% at 20 cM per marker. We did not detect obvious recombination repression in the maternal tree (a hybrid of Populus trichocarpa Hooker x P. deltoides Marsh.) compared to the paternal tree (pure P. deltoides). Finally, most markers exhibiting segregation distortion were derived from the donor parent in this backcross, and generally occurred in large contiguous blocks on two linkage groups. We hypothesize that divergent selection has occurred on chromosomal scales among the parental species used to create this pedigree, and explore the evolutionary implications of this observation. This genetic linkage map provides the most comprehensive view of the Populus genome reported to date and will prove invaluable for future inquiries into the structural and functional genomics, evolutionary biology, and genetic improvement of this ecologically important model species.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.