Evidence map›Paper›PMID 15163754›Full record

ArticleJournal of virology2004

Late assembly motifs of human T-cell leukemia virus type 1 and their relative roles in particle release.

Gisela Heidecker, Patricia A Lloyd, Kristi Fox, Kunio Nagashima, David Derse

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
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  8. Article
  9. Review
  10. Viruses go modular.The Journal of biological chemistry · 2020
    Review
  11. Article
  12. Article
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  16. Article
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  19. WWP1: a versatile ubiquitin E3 ligase in signaling and diseases.Cellular and molecular life sciences : CMLS · 2012
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Gisela HeideckerMolecular Biology of Retroviruses Section, Basic Research Lab, National Cancer Institute/NIH, NCI-Frederick, Bldg. 567, Rm. 155, Frederick, MD 21702-1201, USA. heidecke@ncifcrf.gov
Patricia A Lloyd
Kristi Fox
Kunio Nagashima
David Derse
Frederick National Laboratory for Cancer Research · USScience Applications International Corporation (United States) · US

Funding

SEA Influenza Clinical Research NetworkN01CO12400 · NCI · LEIDOS BIOMEDICAL RESEARCH, INC. · 2007 to 2008
$225.2M
Retrovirus Gene Regulation: HTLV-1 Transmission of RepliZ01BC010003 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI DERSE, DAVID · 1996 to 2008
$2.3M
NCI NIH HHS N01 CO012400NCI NIH HHS N01 CO 12400
6 · The paper itself

Abstract

Three late assembly domain consensus motifs, namely PTAP, PPPY, and LYPXL, have been identified in different retroviruses. They have been shown to interact with the cellular proteins TSG101, Nedd4, and AP2 or AIP, respectively. Human T-cell leukemia virus type 1 (HTLV-1) has a PPPY and a PTAP motif, separated by two amino acids, located at the end of MA, but only the PPPY motif is conserved in the deltaretrovirus group. Like other retroviral peptides carrying the late motif, MA is mono- or di-ubiquitinated. A mutational analysis showed that 90% of PPPY mutant particles were retained in the cell compared to 15% for the wild-type virus. Mutations of the PTAP motif resulted in a 20% decrease in particle release. In single-cycle infectivity assays, the infectious titers of late motif mutants correlated with the amounts of released virus, as determined by an enzyme-linked immunosorbent assay. We observed binding of MA to the WW domains of the Nedd4 family member WWP1 but not to the amino-terminal ubiquitin E2 variant domain of TSG101 in mammalian two-hybrid analyses. The binding to WWP1 was eliminated when the PPPY motif was mutated. However, MA showed binding to TSG101 in the yeast two-hybrid system that was dependent on an intact PTAP motif. A dominant-negative (DN) mutant of WWP1 could inhibit budding of the intact HTLV-1 virus. In contrast, DN TSG101 only affected the release of virus-like particles encoded by Gag expression plasmids. Electron and fluorescent microscopy showed that Gag accumulates in large patches in the membranes of cells expressing viruses with PPPY mutations. Very few tethered immature particles could be detected in these samples, suggesting that budding is impaired at an earlier step than in other retroviruses.

Indexed as

Amino Acid MotifsVirus AssemblyAmino Acid SequenceCell LineGene Products, gagHeLa CellsHumansHuman T-lymphotropic virus 1Molecular Sequence DataMutationProtein PrecursorsVirionGene Products, gagProtein Precursors

Identifiers

PMID15163754
PMCPMC416494
OpenAlexW2137719559

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.