Evidence map›Paper›PMID 15163739›Full record

ArticleJournal of virology2004

Adenovirus protein VII condenses DNA, represses transcription, and associates with transcriptional activator E1A.

Jeffrey S Johnson, Yvonne N Osheim, Yuming Xue, Margaux R Emanuel, Peter W Lewis, Alex Bankovich, Ann L Beyer, Daniel A Engel

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
  2. Article
  3. Mysteries of adenovirus packaging.Journal of virology · 2025
    Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
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  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Adenovirus Structure: What Is New?International journal of molecular sciences · 2021
    Review
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Jeffrey S JohnsonDepartment of Microbiology, University of Virginia Health System, P.O. Box 800734, Charlottesville, VA 22908, USA.
Yvonne N Osheim
Yuming Xue
Margaux R Emanuel
Peter W Lewis
Alex Bankovich
Ann L Beyer
Daniel A Engel
University of Virginia Health System · US

Funding

ADENOVIRUS E1A PROTEIN AND THE SWI/SNF COMPLEXR01CA060675 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI ENGEL, DANIEL A · 2001 to 2005
$1.1M
ADENOVIRUS 243R E1A PROTEIN AND CELLULAR TRANSCRIPTIONR29CA060675 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI ENGEL, DANIEL A · 1995 to 1999
–
NCI NIH HHS CA 60675NCI NIH HHS R01 CA060675NCI NIH HHS R29 CA060675
6 · The paper itself

Abstract

Adenovirus protein VII is the major protein component of the viral nucleoprotein core. It is highly basic, and an estimated 1070 copies associate with each viral genome, forming a tightly condensed DNA-protein complex. We have investigated DNA condensation, transcriptional repression, and specific protein binding by protein VII. Xenopus oocytes were microinjected with mRNA encoding HA-tagged protein VII and prepared for visualization of lampbrush chromosomes. Immunostaining revealed that protein VII associated in a uniform manner across entire chromosomes. Furthermore, the chromosomes were significantly condensed and transcriptionally silenced, as judged by the dramatic disappearance of transcription loops characteristic of lampbrush chromosomes. During infection, the protein VII-DNA complex may be the initial substrate for transcriptional activation by cellular factors and the viral E1A protein. To investigate this possibility, mRNAs encoding E1A and protein VII were comicroinjected into Xenopus oocytes. Interestingly, whereas E1A did not associate with chromosomes in the absence of protein VII, expression of both proteins together resulted in significant association of E1A with lampbrush chromosomes. Binding studies with proteins produced in bacteria or human cells or by in vitro translation showed that E1A and protein VII can interact in vitro. Structure-function analysis revealed that an N-terminal region of E1A is responsible for binding to protein VII. These studies define the in vivo functions of protein VII in DNA binding, condensation, and transcriptional repression and indicate a role in E1A-mediated transcriptional activation of viral genes.

Indexed as

Gene Expression Regulation, ViralAdenovirus E1A ProteinsAdenoviruses, HumanAnimalsCell NucleusChromatinDNA, ViralHeLa CellsHumansOocytesPrecipitin TestsTranscriptional ActivationTranscription, GeneticViral Core ProteinsViral ProteinsXenopusAdenovirus E1A ProteinsChromatinDNA, ViralViral Core ProteinsViral Proteins

Identifiers

PMID15163739
PMCPMC416553
OpenAlexW2062746221

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.