Evidence map›Paper›PMID 15161973›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2004

Heme axial methionine fluxionality in Hydrogenobacter thermophilus cytochrome c552.

Linghao Zhong, Xin Wen, Terry M Rabinowitz, Brandy S Russell, Elizabeth F Karan, Kara L Bren

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.0field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 49 citations in OpenAlex.

  1. Uncovering the hidden RNA virus diversity in Lake Nam Co: Evolutionary insights from an extreme high-altitude environment.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Article
  3. Review
  4. Unusual CytochromeInternational journal of molecular sciences · 2022
    Article
  5. Structural basis for heme detoxification by an ATP-binding cassette-type efflux pump in gram-positive pathogenic bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  6. Contributions to cytochromeChemical science · 2021
    Article
  7. Article
  8. Influence of heme c attachment on heme conformation and potential.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2018
    Article
  9. NMR investigations of nitrophorin 2 belt side chain effects on heme orientation and seating of native N-terminus NP2 and NP2(D1A).Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2014
    Article
  10. Article
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  13. Article
  14. Heme-protein vibrational couplings in cytochrome c provide a dynamic link that connects the heme-iron and the protein surface.Proceedings of the National Academy of Sciences of the United States of America · 2012
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Linghao ZhongDepartment of Chemistry, University of Rochester, Rochester, NY 14627-0216, USA.
Xin Wen
Terry M Rabinowitz
Brandy S Russell
Elizabeth F Karan
Kara L Bren
University of Rochester Medical Center · US

Funding

Dynamics-stability relationship in cytochromes cR01GM063170 · NIGMS · UNIVERSITY OF ROCHESTER · PI BREN, KARA L. · 2002 to 2010
$2.0M
NIGMS NIH HHS GM63170NIGMS NIH HHS R01 GM063170
6 · The paper itself

Abstract

The heme group in paramagnetic (S = 1/2) ferricytochromes c typically displays a markedly asymmetric distribution of unpaired electron spin density among the heme pyrrole beta substituents. This asymmetry is determined by the orientations of the heme axial ligands, histidine and methionine. One exception to this is ferricytochrome c(552) from Hydrogenobacter thermophilus, which has similar amounts of unpaired electron spin density at the beta substituents on all four heme pyrroles. Here, determination of the orientation of the magnetic axes and analysis of NMR line shapes for H. thermophilus ferricytochrome c(552) is performed. These data reveal that the unusual electronic structure for this protein is a result of fluxionality of the heme axial methionine. It is proposed that the ligand undergoes inversion at the pyramidal sulfur, and the rapid interconversion between two diastereomeric forms results in the unusual heme electronic structure. Thus a fluxional process for a metal-bound amino acid side chain has now been identified.

Indexed as

BacteriaBacterial ProteinsBiophysical PhenomenaBiophysicsCytochrome c GroupHemeLigandsMagneticsMethionineModels, MolecularNuclear Magnetic Resonance, BiomolecularBacterial Proteinscytochrome C-552Cytochrome c GroupHemeLigandsMethionine

Identifiers

PMID15161973
PMCPMC423247
OpenAlexW2040973863

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.