Evidence map›Paper›PMID 15155888›Full record

ArticleThe Plant cell2004

The novel Myb transcription factor LCR1 regulates the CO2-responsive gene Cah1, encoding a periplasmic carbonic anhydrase in Chlamydomonas reinhardtii.

Satoshi Yoshioka, Fumiya Taniguchi, Kenji Miura, Takeshi Inoue, Takashi Yamano, Hideya Fukuzawa

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
6.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 127 citations in OpenAlex.

  1. Article
  2. A nuclear CobW/WW-domain factor represses the COProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Regulatory logic of theFrontiers in plant science · 2026
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  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Adapting from Low to High: An Update to COPlants (Basel, Switzerland) · 2023
    Review
  11. Article
  12. Article
  13. Review
  14. Systematic analysis of differentially expressedPhysiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  15. Review
  16. Elucidation and genetic intervention of COJournal of biosciences · 2020
    Article
  17. Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Satoshi YoshiokaDivision of Integrated Life Science, Graduate School of Biostudies, Kyoto University, Oiwake-cho, Sakyo-ku, Kyoto, 606-8502, Japan.
Fumiya Taniguchi
Kenji Miura
Takeshi Inoue
Takashi Yamano
Hideya Fukuzawa
Kyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chlamydomonas reinhardtii acclimates to CO2-limiting stress by inducing a set of genes for a carbon-concentrating mechanism (CCM). This set includes the gene Cah1, which encodes a periplasmic carbonic anhydrase. Although physiological aspects of CO2response have been extensively studied, regulatory components, such as transcription factors involved in the acclimation, have not been well described in eukaryotic microalgae. Using an arylsulfatase gene driven by the Cah1 promoter, a regulatory mutant of Cah1 was isolated and named lcr1 (for low-CO2 stress response). The photosynthetic affinity for inorganic carbon of lcr1 was reduced compared with that of wild-type cells. Expression of three low-CO2-inducible genes, Cah1, Lci1, and Lci6, were regulated by LCR1 as shown by cDNA array and RNA gel blot analyses. The Lcr1 gene encodes a protein of 602 amino acids containing a single Myb domain, which binds to the Cah1-promoter region. Expression of Lcr1 was induced by lowering CO2 levels and controlled by the regulatory factor CCM1. These results suggest that LCR1 transmits the low CO2 signal to at least three CO2-responsive genes and then fully induces CCM.

Indexed as

Adaptor Proteins, Signal TransducingAlgal ProteinsAmino Acid SequenceAnimalsCarbon DioxideCarbonic AnhydrasesChlamydomonas reinhardtiiDNAGene Expression Regulation, EnzymologicGenetic Complementation TestMolecular Sequence DataMutationOligonucleotide Array Sequence AnalysisPeriplasmPlant ProteinsPromoter Regions, GeneticAdaptor Proteins, Signal TransducingAlgal ProteinsCarbon DioxideCarbonic Anhydrasesccm1 protein, Chlamydomonas reinhardtiiDNAPlant ProteinsProto-Oncogene Proteins c-mybRNA, MessengerTrans-ActivatorsTranscription Factors

Identifiers

PMID15155888
PMCPMC490039
OpenAlexW2114266476

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.