Evidence map›Paper›PMID 15155879›Full record

ArticleThe Plant cell2004

Constitutive photomorphogenesis 1 and multiple photoreceptors control degradation of phytochrome interacting factor 3, a transcription factor required for light signaling in Arabidopsis.

Diana Bauer, András Viczián, Stefan Kircher, Tabea Nobis, Roland Nitschke, Tim Kunkel, Kishore C S Panigrahi, Eva Adám, Erzsébet Fejes, Eberhard Schäfer and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 207 papers.

0numbers the graph read from it
0cells of the map it votes in
207citing papers in PubMed
32.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

207 citing papers in PubMed, 445 citations in OpenAlex.

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  8. TheProceedings of the National Academy of Sciences of the United States of America · 2025
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  19. Isolation of Phytochrome B Photobodies.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  20. How does light regulate plant regeneration?Frontiers in plant science · 2024
    Review

147 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Diana BauerBiologie II/Institut für Botanik, University of Freiburg, Freiburg, Germany D-79104.
András Viczián
Stefan Kircher
Tabea Nobis
Roland Nitschke
Tim Kunkel
Kishore C S Panigrahi
Eva Adám
Erzsébet Fejes
Eberhard Schäfer
Ferenc Nagy
University of Freiburg · DEHUN-REN Szegedi Biológiai Kutatóközpont · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Light, in a quality- and quantity-dependent fashion, induces nuclear import of the plant photoreceptors phytochrome, promotes interaction of phytochrome A (phyA) and phyB with transcription factors including phytochrome interacting factor 3 (PIF3), and is thought to trigger a transcriptional cascade to regulate the expression of approximately 2500 genes in Arabidopsis thaliana. Here, we show that controlled degradation of the transcription factor PIF3 is a major regulatory step in light signaling. We demonstrate that accumulation of PIF3 in the nucleus in dark requires constitutive photomorphogenesis 1 (COP1), a negative regulator of photomorphogenesis, and show that red (R) and far-red light (FR) induce rapid degradation of the PIF3 protein. This process is controlled by the concerted action of the R/FR absorbing phyA, phyB, and phyD photoreceptors, and it is not affected by COP1. Rapid light-induced degradation of PIF3 indicates that interaction of PIF3 with these phytochrome species is transient. In addition, we provide evidence that the poc1 mutant, a postulated PIF3 overexpressor that displays hypersensitivity to R but not to FR, lacks detectable amounts of the PIF3 protein. Thus, we propose that PIF3 acts transiently, and its major function is to mediate phytochrome-induced signaling during the developmental switch from skotomorphogenesis to photomorphogenesis and/or dark to light transitions.

Indexed as

LightPhotoreceptor CellsArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsMutationPhytochromePhytochrome APhytochrome BPlants, Genetically ModifiedProtein Processing, Post-TranslationalSeedlingsSignal TransductionTranscription FactorsUbiquitin-Protein LigasesArabidopsis ProteinsAT2G32950 protein, ArabidopsisBasic Helix-Loop-Helix ProteinsPHYA protein, ArabidopsisPHYB protein, ArabidopsisPhytochromePhytochrome APhytochrome BPIF3 protein, ArabidopsisTranscription FactorsUbiquitin-Protein Ligases

Identifiers

PMID15155879
PMCPMC490037
OpenAlexW2170533247

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.