Evidence map›Paper›PMID 15154112›Full record

ArticleAmerican journal of human genetics2004

Mechanism and timing of mitotic rearrangements in the subtelomeric D4Z4 repeat involved in facioscapulohumeral muscular dystrophy.

Richard J L F Lemmers, Petra G M Van Overveld, Lodewijk A Sandkuijl, Harry Vrieling, George W Padberg, Rune R Frants, Silvère M van der Maarel

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Chromosome 10q-linked FSHD identifiesJournal of medical genetics · 2022
    Article
  9. Subtelomeric Transcription and its Regulation.Journal of molecular biology · 2020
    Review
  10. Review
  11. Article
  12. Genotype-phenotype correlations in FSHD.BMC medical genomics · 2019
    Review
  13. Observational
  14. Article
  15. Genetic and epigenetic contributors to FSHD.Current opinion in genetics & development · 2015
    Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Richard J L F LemmersCenter for Human and Clinical Genetics, Leiden University Medical Center, Leiden, The Netherlands.
Petra G M Van Overveld
Lodewijk A Sandkuijl
Harry Vrieling
George W Padberg
Rune R Frants
Silvère M van der Maarel
Center for Human Genetics · USLeiden University Medical Center · NLRadboud University Nijmegen · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autosomal dominant facioscapulohumeral muscular dystrophy (FSHD1A) is associated with contractions of the polymorphic D4Z4 repeat on chromosome 4qter. Almost half of new FSHD mutations occur postfertilization, resulting in somatic mosaicism for D4Z4. Detailed D4Z4 analysis of 11 mosaic individuals with FSHD revealed a mosaic mixture of a contracted FSHD-sized allele and the unchanged ancestral allele in 8 cases, which is suggestive of a mitotic gene conversion without crossover. However, in 3 cases, the D4Z4 rearrangement resulted in two different-sized D4Z4 repeats, indicative of a gene conversion with crossover. In all cases, DNA markers proximal and distal to D4Z4 showed no allelic exchanges, suggesting that all rearrangements were intrachromosomal. We propose that D4Z4 rearrangements occur via a synthesis-dependent strand annealing model that relatively frequently allows for crossovers. Furthermore, the distribution of different cell populations in mosaic patients with FSHD suggests that mosaicism here results from D4Z4 rearrangements occurring during the first few zygotic cell divisions after fertilization.

Indexed as

Genes, HomeoboxMitosisRepetitive Sequences, Nucleic AcidAllelesChildChromosomes, Human, Pair 4FemaleGene ConversionGene RearrangementHumansMaleMosaicismMuscular Dystrophy, FacioscapulohumeralPedigreePhenotypeTelomere

Identifiers

PMID15154112
PMCPMC1182007
OpenAlexW2153771585

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.