Evidence map›Paper›PMID 15153070›Full record

ArticleThe Biochemical journal2004

A co-translational model to explain the in vivo import of proteins into HeLa cell mitochondria.

Abhijit Mukhopadhyay, Li Ni, Henry Weiner

Open access · bronzeAbstract read
In one paragraph

Article in The Biochemical journal, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Computational Evaluation of Peroxisomal Targeting Signals in Metazoa.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  3. Article
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  5. Article
  6. Article
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  8. Article
  9. Antibiotic use and abuse: a threat to mitochondria and chloroplasts with impact on research, health, and environment.BioEssays : news and reviews in molecular, cellular and developmental biology · 2015
    Article
  10. Review
  11. Review
  12. Review
  13. Review
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  15. Article
  16. Review
  17. mRNA trafficking in fungi.Molecular genetics and genomics : MGG · 2007
    Review
  18. Delivery of drugs and macromolecules to mitochondria.Advanced drug delivery reviews · 2007
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Abhijit MukhopadhyayDepartment of Biochemistry, Purdue University, 175 S. University Street, West Lafayette, IN 47907-2063, USA.
Li Ni
Henry Weiner
Purdue University West Lafayette · US

Funding

Molecular mechanisms of Drosophilia immune responseR01GM053269 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI IP, Y. TONY · 1995 to 2008
$2.3M
INTERACTION OF ALDH WITH MITOCHONDRIAL IMPORT APPARATUSR01AA010795 · NIAAA · PURDUE UNIVERSITY WEST LAFAYETTE · PI WEINER, HENRY · 1996 to 2000
$301k
NIAAA NIH HHS AA10795NIGMS NIH HHS GM 53269NIGMS NIH HHS R01 GM053269
6 · The paper itself

Abstract

The dual signal approach, i.e. a mitochondrial signal at the N-terminus and an ER (endoplasmic reticulum) or a peroxisomal signal at the C-terminus of EGFP (enhanced green fluorescent protein), was employed in transfected HeLa cells to test for a co-translational import model. The signal peptide from OTC (ornithine transcarbamylase) or arginase II was fused to the N-terminus of EGFP, and an ER or peroxisomal signal was fused to its C-terminus. The rationale was that if the free preprotein remained in the cytosol, it could be distributed between the two organelles by using a post-translational pathway. The resulting fusion proteins were imported exclusively into mitochondria, suggesting that co-translational import occurred. Native preALDH (precursor of rat liver mitochondrial aldehyde dehydrogenase), preOTC and rhodanese, each with the addition of a C-terminal ER or peroxisomal signal, were also translocated only to the mitochondria, again showing that a co-translational import pathway exists for these native proteins. Import of preALDH(sp)-DHFR, a fusion protein consisting of the leader sequence (signal peptide) of preALDH fused to DHFR (dihydrofolate reductase), was studied in the presence of methotrexate, a substrate analogue for DHFR. It was found that 70% of the preALDH(sp)-DHFR was imported into mitochondria in the presence of methotrexate, implying that 70% of the protein utilized the co-translational import pathway and 30% used the post-translational import pathway. Thus it appears that co-translational import is a major pathway for mitochondrial protein import. A model is proposed to explain how competition between binding factors could influence whether or not a cytosolic carrier protein, such as DHFR, uses the co- or post-translational import pathway.

Indexed as

Models, GeneticAldehyde DehydrogenaseCell Line, TumorGreen Fluorescent ProteinsHeLa CellsHumansImmunoblottingMethotrexateMicroscopy, FluorescenceMitochondriaMitochondrial ProteinsMolecular WeightPeroxisomesProtein BiosynthesisProtein Sorting SignalsProtein TransportAldehyde Dehydrogenaseenhanced green fluorescent proteinGreen Fluorescent ProteinsMethotrexateMitochondrial ProteinsProtein Sorting SignalsRecombinant Fusion ProteinsTetrahydrofolate Dehydrogenase

Identifiers

PMID15153070
PMCPMC1133951
OpenAlexW2026268968

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.